Query= MSMg01no218_g24.b1 MSMg01no218_g24.b1 CHROMAT_FILE:
MSMg01no218_g24.b1 PHD_FILE: MSMg01no218_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:27 2005
(316 letters)
>mm_chr1_131581350_131582065
Length = 716
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%)
Strand = Plus / Minus
Query: 5 gaattccaaggctgctgtctctgacaccttgaggtattctatgctccccttgtgagacct 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 515 gaattccaaggctgctgtctctgacaccttgaggtattctatgctccccttgtgagacat 456
Query: 65 tgcttgattagctttctgcctactagcatcccattttgtttccaaaaccagcatatatga 124
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 455 tgcttgattagctttctgcctactagcatcccattttgttttcaaaacctgcatatatga 396
Query: 125 gattctgtaatttttaataagtgtgcttgcatgagccatcagcatgtgtgagattcccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gattctgtaatttttaataagtgtgcttgcatgagccatcagcatgtgtgagattcccca 336
Query: 185 gtgacaaactttcttatcttctcccatcctggtcatctcattcctggaaacctgttgctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtgacaaactttcttatcttctcccatcctggtcatctcattcctggaaacctgttgctg 276
Query: 245 aagaacaacctgctgctctatgtcatggaataaaataaaatcttacaaaatagaggaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aagaacaacctgctgctctatgtcatggaataaaataaaatcttacaaaatagaggaaaa 216
Query: 305 aaatctctttg 315
|||||||||||
Sbjct: 215 aaatctctttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_g24.g1 MSMg01no218_g24.g1 CHROMAT_FILE:
MSMg01no218_g24.g1 PHD_FILE: MSMg01no218_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:27 2005
(293 letters)
>mm_chr1_131503367_131504059
Length = 693
Score = 429 bits (222), Expect = e-125
Identities = 280/322 (86%), Gaps = 36/322 (11%)
Strand = Plus / Plus
Query: 1 ctaactaatatgcagaaggctctaggttatatgtctagtatcataaaactgaaaatagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ctaactaatatgcagaaggctctaggttatatgtctagtatcataaaactgaaaatagtt 236
Query: 61 actctaatcagcatttatgagcca------------------------------acacac 90
|||||||||||||||||||||||| ||||||
Sbjct: 237 actctaatcagcatttatgagccaacacacacacacacacacacacacacacacacacac 296
Query: 91 acacacacacacacacacacacacacacctctctacacaaagctagggactgggcaaact 150
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 297 acacacacacacacacacacacacacacctctatacacaaagcta------gggcaaact 350
Query: 151 gaaaactaaggactgaggaagactctgagaaaatggtctggtcattgcgttgtcagctga 210
||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 351 gaaaactaaggaccgaggaagactctgggaaaatggtctggtcattgtgttgtcagctga 410
Query: 211 tggtgatgtttacctcctgatgagacccacctgtaatcaaagagcttttaatttgtgatg 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tggtgatgtttacctcctgatgagacccacctgtaatcaaagagcttttaatttgtgatg 470
Query: 271 gaagttgcaaccataactccta 292
||||| |||||||||| |||||
Sbjct: 471 gaagtcgcaaccataattccta 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
