Query= MSMg01no232_p07.b1 MSMg01no232_p07.b1 CHROMAT_FILE:
MSMg01no232_p07.b1 PHD_FILE: MSMg01no232_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:34 2005
(611 letters)
>mm_chr1_74513092_74514102
Length = 1011
Score = 1114 bits (576), Expect = 0.0
Identities = 600/612 (98%), Gaps = 8/612 (1%)
Strand = Plus / Minus
Query: 4 ggaattctcaaaag----ttccggcatggtatcataaataactacttgaaagtttaggta 59
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggaattctcaaaagagaa----ggcatggtatcataaataactacttgaaagtttaggta 628
Query: 60 ttgatttagtaattctgttgctcaagacacagcatttaaactggttaagagttgtcattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttgatttagtaattctgttgctcaagacacagcatttaaactggttaagagttgtcattt 568
Query: 120 cactgaactagtgagactaaagattatttgcatttaagtgggttaatgccaattcaactt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cactgaactagtgagactaaagattatttgcatttaagtgggttaatgccaattcaactt 508
Query: 180 catccttatttttttctcatctttttataggcagaagaacttgaatactcatgtgaaaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 catccttatttttttctcatctttttataggcagaagaacttgaatactcatgtgaaaag 448
Query: 240 tgtggtggaaaatgtgctcttgtcaggcacaaatttaatatgctgcccaggtaaatttga 299
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 447 tgtggtggaaaatgtgctcttgtcaggcacaaatttaacaggctgcccaggtaaatttga 388
Query: 300 ctgccatttaaaaggtgtatgttcctaaaccagtggagatacaatgtttgcctgatctct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctgccatttaaaaggtgtatgttcctaaaccagtggagatacaatgtttgcctgatctct 328
Query: 360 acaagggcttacattcgatccctaagcccaataagtaagcaaacgaacgtatttaaatga 419
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acaagggcttacatttgatccctaagcccaataagtaagcaaacgaacgtatttaaatga 268
Query: 420 catcatgaataatggcttaacattatgaattaaatatcaggaaagttcacctagaaaaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catcatgaataatggcttaacattatgaattaaatatcaggaaagttcacctagaaaaag 208
Query: 480 aggagggctgtagagacagcacaatggttagatgcatcagctactcttgcagaggacctg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aggagggctgtagagacagcacaatggttagatgcatcagctactcttgcagaggacctg 148
Query: 540 cgttcatttcctagtacccattttgtagctctcagccatctatagcttcagtttcaaggg 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ggttcatttcctagtacccattttgtagctctcagccatctatagcttcagtttcaaggg 88
Query: 600 attgaaacccaa 611
||||||||||||
Sbjct: 87 attgaaacccaa 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_p07.g1 MSMg01no232_p07.g1 CHROMAT_FILE:
MSMg01no232_p07.g1 PHD_FILE: MSMg01no232_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:34 2005
(293 letters)
>mm_chr1_74445610_74446302
Length = 693
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Plus
Query: 1 tgggaattgaactatggacctcatagatgccaggcaagtgttttaccaccgagagctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tgggaattgaactatggacctcatagatgccaggcaagtgttttaccactgagagctgta 260
Query: 61 cagcagccgcagccgagtcactaagacaatgaggagtactgagtactgaagtttcagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcagccgcagccgagtcactaagacaatgaggagtactgagtactgaagtttcagtac 320
Query: 121 ttagggtaagtgtgaaggatgagtaaacttggggagagctgctgtagccgacgactctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagggtaagtgtgaaggatgagtaaacttggggagagctgctgtagccgacgactctgt 380
Query: 181 caccagaaagtgaataaatgagaaagagacgtgtcttttgagacagcatcttgtgaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caccagaaagtgaataaatgagaaagagacgtgtcttttgagacagcatcttgtgaggtc 440
Query: 241 caagagatcctcctgcctcaccttccaagtgctcatgtcagcttatgtc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagagatcctcctgcctcaccttccaagtgctcatgtcagcttatgtc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
