CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTAAGAATGTTACTTATTCAGTAACATTCAAATTCACTTCTAGC
AGAGACAGTGAAACTAATTAGGCTTTACAATTTACTTGAACAGAGCTAGA
AAAGCTCAGGGCTAGTCTACATAGTAATTACTTAGGACAATAGCGGAGTC
ACATCCAAACACAGGAATACACAATGGCCTAGGAAATATGTGGATTGTAG
TATTATTCATGGAAGGATTAGTAGAACAGAATTCCCCTGGTGCAGGTTTT
TCACTAGGCCCAGAGGAATAGCATAATCAGGTATTTACTAAAGGACCCCT
GGTGGTGGATTTAACAATAGACTACCATTGCATCAGAGCATTCATCTGGC
TCCTGTGTTTAGGTGATCTTAATTAAGGGTTGTTCCTATCGCAGTTGTAA
ACAGGTCCTGGCTCCCGTTATCTTTTTATGTATGCATTTTCTTTGTTTTG
TGTTAAAATCCAGTGTACCTTGACAGATGTATTCACCTAGCTTTCTTGTT
TTTCTTCTGTAATATAAGACTGGTGCTCACTTTAAGAAAATACATCCAGA
TACATCACTCCCTTGTGTTCATGTCTGTTTTTCACCCTTTTCGTTACTCT
TTTCGTTGCCAACGCCATGCCCACCTGTCTGGAACCCTAATTTCCCATGG
ATTGAGAGAGGCTGACTGGGG

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAGTTAGATGGTTTCAGGCCT
CTGCGTTACTCTTTAGTGTTGCATTCTGAAATTTTTGTTTTTTTCACATA
GATTTGAGAACATTGTTGCCAACATTTAGAAAATAGATTGCAGGGATTTT
GCTTGATAGTGTGTTGAGTCTGCTGACTGAGTTAGAGTTGGCATGTTGAC
AAGTTTTATAGCTTGTAAAAAAATAGACTTAATATTTATTCTTGTGTGAT
GTCTGTTTTCCCTAGAGCCATTAGCACATTAGTCATAGTTATTTTACATT
TTCTGATAATTATAAAACCAATGTTATATCTGAGCCTCCTAGTATTTACA
TTTCTCCAAAGGCCTTGATGCCTGCAGTACCCTTGTTTCTTCTGTTAACT
TTGGGTATCAATAAGAAAATCTTCTAAAGCGCAGCCATCACTCTGCAGTT
CTTCTAGTATTGTCTATTCTCTTACTGAAGTCTTGTTGACACTGTATTAA
GCAGCAGCAAAAGACAAATAATTAATGTTCTTGTGATTAAATGTTAGTCT
TTTATTGGTGGCATATTCCTGGCTGTTAGCATTCAAAGTGTTTCTAATCT
CTTAGTATTTTCCTTCTGCTTGCCACACATGTGAGAAAACGTAGGTGAAA
TTGGGGTTN

Query= MSMg01no233_k05.g1 MSMg01no233_k05.g1 CHROMAT_FILE:
MSMg01no233_k05.g1 PHD_FILE: MSMg01no233_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:23 2005
         (631 letters)



>mm_chr1_45758279_45759309
          Length = 1031

 Score =  843 bits (436), Expect = 0.0
 Identities = 448/456 (98%), Gaps = 7/456 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   aagttagatggtttcaggcctctgcgttactctttagtgttg-------cattctgaaat 56
           ||||||||||||||||||||||||||||||||||||||||||       |||||||||||
Sbjct: 456 aagttagatggtttcaggcctctgcgttactctttagtgttgcactagacattctgaaat 397

                                                                       
Query: 57  ttttgtttttttcacatagatttgagaacattgttgccaacatttagaaaatagattgca 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttttgtttttttcacatagatttgagaacattgttgccaacatttagaaaatagattgca 337

                                                                       
Query: 117 gggattttgcttgatagtgtgttgagtctgctgactgagttagagttggcatgttgacaa 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gggattttgcttgatagtgtgttgagtctgctgactgagttagagttggcatgttgacaa 277

                                                                       
Query: 177 gttttatagcttgtaaaaaaatagacttaatatttattcttgtgtgatgtctgttttccc 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gttttatagcttgtaaaaaaatagacttaatatttattcttgtgtgatgtctgttttccc 217

                                                                       
Query: 237 tagagccattagcacattagtcatagttattttacattttctgataattataaaaccaat 296
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 216 tagagccattagcacattagtcatagctattttacattttctgataattataaaaccaat 157

                                                                       
Query: 297 gttatatctgagcctcctagtatttacatttctccaaaggccttgatgcctgcagtaccc 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gttatatctgagcctcctagtatttacatttctccaaaggccttgatgcctgcagtaccc 97

                                                                       
Query: 357 ttgtttcttctgttaactttgggtatcaataagaaaatcttctaaagcgcagccatcact 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ttgtttcttctgttaactttgggtatcaataagaaaatcttctaaagcgcagccatcact 37

                                               
Query: 417 ctgcagttcttctagtattgtctattctcttactga 452
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  ctgcagttcttctagtattgtctattctcttactga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)