Query= MSMg01no237_m13.b1 MSMg01no237_m13.b1 CHROMAT_FILE:
MSMg01no237_m13.b1 PHD_FILE: MSMg01no237_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:41 2005
(194 letters)
>mm_chr1_152571824_152572417
Length = 594
Score = 344 bits (178), Expect = 2e-99
Identities = 190/194 (97%)
Strand = Plus / Plus
Query: 1 ataaaatggaagcaagaaaataattagtgaagtgtccagagcttagatgtgtggagttta 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaatggaagcaagaaaagaattagtgaagtgtccagagcttagatgtgtggagttta 260
Query: 61 aacatctgtgcaccatgactgtatcattgcttagcaagtccttcgtgcagaatggctgtg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 aacatctgtgcaccatgactgtatcattgcttagcaagtcctacgtgcagaatggctgtg 320
Query: 121 tgttaatgagtccctggtgccaatggtgtgttttatttgttgttactgacatggacacca 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttaatgagcccctggtgccaatggtgtgttttatttgttgttactgacatggacacca 380
Query: 181 gtaatactgtgacc 194
||||| ||||||||
Sbjct: 381 gtaatcctgtgacc 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no237_m13.g1 MSMg01no237_m13.g1 CHROMAT_FILE:
MSMg01no237_m13.g1 PHD_FILE: MSMg01no237_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:41 2005
(369 letters)
>mm_chr1_152719869_152720636
Length = 768
Score = 661 bits (342), Expect = 0.0
Identities = 357/362 (98%), Gaps = 1/362 (0%)
Strand = Plus / Minus
Query: 3 agggtcatttgatttttttacctccaaaaagacaaaaacaaaacaaaagagaacacgact 62
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 563 agggtcatttgatttttttacctccaaaaagacaaaaacaaaacaaaagaaaacactact 504
Query: 63 ctcttggaagtggagctggggtccacatctctagacatttgcgctgggcgaggcatgtct 122
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 503 ctcttggaagtggagctggggtccacatctctagacatttgctctgggcgaggcatgtct 444
Query: 123 aattaattattatttattgctgttttgttttggctttgtgttgtcataagatccacaagg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aattaattattatttattgctgttttgttttggctttgtgttgtcataagatccacaagg 384
Query: 183 gcccaattagaatatcttgttgagaaagaaatgagatattcagtttttcctttcattcaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcccaattagaatatcttgttgagaaagaaatgagatattcagtttttcctttcattcaa 324
Query: 243 cactgagtgctattacacgcatcaagagaccatgggagtattttaattcgaaactttcta 302
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cactgagtgctattacacacatcaagagaccatgggagtattttaattcgaaactttcta 264
Query: 303 gtgaatgcttctcttttcaataaaagcaaaaaactttattaagtaagggccaaatcaaac 362
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 263 gtgaatgcttctcttttcaataaaagc-aaaaactttattaagtaagggccaaatcaaac 205
Query: 363 aa 364
||
Sbjct: 204 aa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 768
Length adjustment: 9
Effective length of query: 360
Effective length of database: 759
Effective search space: 273240
Effective search space used: 273240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
