Query= MSMg01no260_a21.b1 MSMg01no260_a21.b1 CHROMAT_FILE:
MSMg01no260_a21.b1 PHD_FILE: MSMg01no260_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:02 2005
(229 letters)
>mm_chr1_163764557_163765186
Length = 630
Score = 377 bits (195), Expect = e-109
Identities = 216/223 (96%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 8 gaattcatttctggt-tcccatctaagagaagagactgagaaagagtttgagggtagctt 66
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatttctggagtaacatctaagagaagagactgagaaagagtttgagggtagctt 267
Query: 67 ggttcaagttcaattgcgtccactgtgtgatttatcaaatgcccctggtgcacactactt 126
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggttcaagttcaattgtgtccactgtgtgatttatcaaatgcccctggtgcacactactt 327
Query: 127 aaatcatccagatcaacagtttcagcttctctttccatgttctcgttatccacatcgcca 186
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 328 aaatcatccagatcaacagtttcagcttctctttccatgttctcgctatccacatcgcca 387
Query: 187 ctggtaggctgcggtactgaaacctctactgattctacaggaa 229
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgggaggctgcggtactgaaacctctactgattctacaggaa 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no260_a21.g1 MSMg01no260_a21.g1 CHROMAT_FILE:
MSMg01no260_a21.g1 PHD_FILE: MSMg01no260_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:02 2005
(349 letters)
>mm_chr1_163951222_163951975
Length = 754
Score = 580 bits (300), Expect = e-170
Identities = 339/356 (95%), Gaps = 13/356 (3%)
Strand = Plus / Minus
Query: 1 agaggaagtgg-gggggg-tagcttcagggcagcaggagcttgtctgaaagagtgaagca 58
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 agaggaagtggtggggggatagcttcagggcagcaggagcttgtctgaaagagtgaagca 493
Query: 59 gatttgaaatttgaagggggtctacatgagaaagagtgggagggagagagggcttctgga 118
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 492 gatttgaaattcgaagggggtctacatgagaaagagtgggagggagagggggcttctgga 433
Query: 119 aaggggcttatgcagataacagacaggtgtgtgtagtagtggtagaatagcaataatagt 178
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 432 aaggggcttatgcagataacagacaggtgtgtgtagtagtggtagaatagcagtaatagt 373
Query: 179 agtagcagcag------tga-tagttttgcgtttaaaataaagttttaactagaaatgtt 231
||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agtagcagcagcagcagt-agtagttttgcgtttaaaataaagttttaactagaaatgtt 314
Query: 232 ttagattcttttcatctaaaatatgtgtgtgtcacaagcctgttttaaaaaaaggaagaa 291
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 313 ttagattcttttcatctaaaatatgtgtgtgtcacaagcctgtta-aaaaaaa--aagaa 257
Query: 292 caaaaaagaacagaactgttacaccagatgcaattcttttagtgacccaagaccac 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caaaaaagaacagaactgttacaccagatgcaattcttttagtgacccaagaccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 754
Length adjustment: 9
Effective length of query: 340
Effective length of database: 745
Effective search space: 253300
Effective search space used: 253300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
