Query= MSMg01no260_c12.b1 MSMg01no260_c12.b1 CHROMAT_FILE:
MSMg01no260_c12.b1 PHD_FILE: MSMg01no260_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:10 2005
(508 letters)
>mm_chr1_131827854_131828760
Length = 907
Score = 936 bits (484), Expect = 0.0
Identities = 502/508 (98%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 1 actattctacatgttttatatatagtgttagaataaaaaaaataatgtaatctctgagat 60
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 201 actattctacatgttttatatatagtgttagagtaaaataaataatgtaatctctgagat 260
Query: 61 ctaactgagtgatattaagaagatacacaccgagaatattcttaaactgctatgagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaactgagtgatattaagaagatacacaccgagaatattcttaaactgctatgagaaaa 320
Query: 121 gtgccatggttgtatggaggataaaaattgaggatagttcaaacactgattggtatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgccatggttgtatggaggataaaaattgaggatagttcaaacactgattggtatgtga 380
Query: 181 aaaaaaaaatgaaggcaggtaggtatgtcagtaggcatggggcacttctctgctagacag 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaaaa-tgaaggcaggtaggtatgtcagtaggcatggggcacttctctgctagacag 439
Query: 241 tccaaagacataactaaatgggaatgcaatacattcagtgtttatattatttccctgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccaaagacataactaaatgggaatgcaatacattcagtgtttatattatttccctgttt 499
Query: 301 tccttgaacccaggcagtaacatttttgcctatgtttttatagatctttcaaatatgtaa 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 500 tccttgaacccaggcagtaacatttttgcatatgtttttatagatctttcaaatatgtaa 559
Query: 361 aagtggataaaatgcacaactaaattaatatagtagctattgacagtttcattttgcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagtggataaaatgcacaactaaattaatatagtagctattgacagtttcattttgcagt 619
Query: 421 caaagaaccctgaagtctgtgttttagaaattgccataaagttttgtatcccccattctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caaagaaccctgaagtctgtgttttagaaattgccataaagttttgtatcccccattctg 679
Query: 481 agcttccatgttgaacatccctttgggg 508
|| |||||||||||||| ||||||||||
Sbjct: 680 agtttccatgttgaacagccctttgggg 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space: 446706
Effective search space used: 446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_c12.g1 MSMg01no260_c12.g1 CHROMAT_FILE:
MSMg01no260_c12.g1 PHD_FILE: MSMg01no260_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:10 2005
(656 letters)
>mm_chr1_131971487_131972542
Length = 1056
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%)
Strand = Plus / Minus
Query: 213 tatattgtttatttatttatgtatgcatgtatttatttaatgtatgtgagtacactgttg 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 tatattgtttatttatttatgtatgcatgtatttatttaatgtatgtgagtacactgttg 997
Query: 273 ctgtcttcagacacaccagaagagagcatcagatccccatttcagatgtttgttagtcac 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 ctgtcttcagacacaccagaagagagcatcagatccccatttcagatgtttgttagtcac 937
Query: 333 catgtagctactgggaattgaactcaggacctctggaagagcagtcagtgctcttaactg 392
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 catgtagttactgggaattgaactcaggacctctggaagagcagtcagtgctcttaactg 877
Query: 393 ctgagccatctctccagcccatactatgtctacttaaattagtagatatactactgaaaa 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 ctgagccatctctccagcccatactatgtctacttaaattagtagatatactactgaaaa 817
Query: 453 gaacattactttaagatagctctctgaattatcttagatttatatatgaatatcattgtc 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gaacattactttaagatagctctctgaattatcttagatttatatatgaatatcattgtc 757
Query: 513 aatttatgtattataaactgtgtattgtatatacatatataaagatatatgtgaagattt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aatttatgtattataaactgtgtattgtatatacatatataaagatatatgtgaagattt 697
Query: 573 gtgattctatatgaatccataattcatgtataaagtacatatcttgagatttttatctgc 632
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 696 gtgattctatatgaatccataattcatgtaaaaagtacatatcttgagatttttatctgc 637
Query: 633 atactcatctactttataaacata 656
||||||||||||||||||||||||
Sbjct: 636 atactcatctactttataaacata 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
