Query= MSMg01no260_g12.b1 MSMg01no260_g12.b1 CHROMAT_FILE:
MSMg01no260_g12.b1 PHD_FILE: MSMg01no260_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:29 2005
(608 letters)
>mm_chr1_102918711_102919718
Length = 1008
Score = 1114 bits (576), Expect = 0.0
Identities = 597/604 (98%), Gaps = 1/604 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcccttccctgtgtttatcttcctatagttgacagttgctgtgttgctaggt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 gaattctttcccttgcctgtgtttatcttcctatagttgacagttgctgtgttgctaggt 935
Query: 65 cattctgaaaaaaaaaatgtctgtctcctggatataagcagagatgattcagttcttaaa 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 934 cattctg-aaaaaaaaatgtctgtctcctggatataagcagagatgattcagttctttaa 876
Query: 125 aacactctttcttttctttcccatttcttggtttctccttccttcttcccttttttcatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 aacactctttcttttctttcccatttcttggtttctccttccttcttcccttttttcatc 816
Query: 185 cattcttgaataacccgatccttatgtctggtgtctatgtatgagtactacagcaatgtc 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 815 cattcttgaataacccgatccttatgtctggtgtctatgtctgagtactacagcaatgtc 756
Query: 245 tgaaaacagcaatgttgtctttgtgagtctccctgataaactaactacaggctgcctggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgaaaacagcaatgttgtctttgtgagtctccctgataaactaactacaggctgcctggc 696
Query: 305 tctatcttgacttttctttgaatcatctgctcagagtttcataactgacatgtttctaca 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tctaccttgacttttctttgaatcatctgctcagagtttcataactgacatgtttctaca 636
Query: 365 gtctgcaaaggcagagacacccatatcaccaagacctggtttcttttctcagtatttttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gtctgcaaaggcagagacacccatatcaccaagacctggtttcttttctcagtatttttt 576
Query: 425 ctctcaggccagtgtattacctatcctctgacattttggtattgtaagtaaggaaaaata 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 575 ctctcaggccagtgtattacctatcctctgacattttggtattgtaagtaaggataaata 516
Query: 485 gagctatacctctgtcatatttatttgaattattcatagttaaatataatacttaaagca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gagctatacctctgtcatatttatttgaattattcatagttaaatataatacttaaagca 456
Query: 545 ttgcttcttatttaatggtaagatggttagcgtaactcctgcaacttccctgtaacatgg 604
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 455 ttgcttcttatttaatggtaagatggttagtgtaactcctgcaacttccctgtaacatgg 396
Query: 605 tagc 608
||||
Sbjct: 395 tagc 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_g12.g1 MSMg01no260_g12.g1 CHROMAT_FILE:
MSMg01no260_g12.g1 PHD_FILE: MSMg01no260_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:29 2005
(559 letters)
>mm_chr1_102776252_102777211
Length = 960
Score = 1029 bits (532), Expect = 0.0
Identities = 553/560 (98%), Gaps = 1/560 (0%)
Strand = Plus / Plus
Query: 1 aagtgttccagaaatagctgtgtctttcatcagtgtaggtccagtaagtaaataatgatg 60
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aagtgttccagaaatagccgtgtctttcatcagtgtgggtccagtaagtaaataatgatg 260
Query: 61 ttagacagaagatttgctctaggaagaactgagcaataggtcccaaaagacagaacgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagacagaagatttgctctaggaagaactgagcaataggtcccaaaagacagaacgtaa 320
Query: 121 agaacaatgaatgggcaagtcaagattctgaaacagaatgtaaagataactctagctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaacaatgaatgggcaagtcaagattctgaaacagaatgtaaagataactctagctagt 380
Query: 181 catcaagatataaagataatggcattgcggtactttagacagtatctgagcactgtaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcaagatataaagataatggcattgcggtactttagacagtatctgagcactgtaaac 440
Query: 241 tcacaatacggagggctattgccttccccc-tcaatgataagtagcagagatgggtgtga 299
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tcacaatatggagggctattgccttcccccctcaatgataagtagcagagatgggtgtga 500
Query: 300 tttgttttctctcagcctattccatctggtttcttgagctaacgaagctcaaaatgtgaa 359
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 tttgttttctctcagcctattccatctggtttcttgagctaaggaagctcaaaatgtgaa 560
Query: 360 gtaagggtggtccatattaggcaggtcagattaaagaaatgacaaggattcagctctaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaagggtggtccatattaggcaggtcagattaaagaaatgacaaggattcagctctaga 620
Query: 420 tgctgtcgtccttttccctagtaaactttaaaaatgtaggtgcttaaacccctgtgtata 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 tgctgtcgtccttttccctagtaaactttaaaaatgtaggtgcttaaacccctgtgcata 680
Query: 480 tcacttcttcttttatatcttttagacttagttccaggtaagctggacttcctcaaccaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcacttcttcttttatatcttttagacttagttccaggtaagctggacttcctcaaccaa 740
Query: 540 tatatacttgctctagcagt 559
|||||||||||||||||||
Sbjct: 741 catatacttgctctagcagt 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 960
Length adjustment: 10
Effective length of query: 549
Effective length of database: 950
Effective search space: 521550
Effective search space used: 521550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
