Query= MSMg01no260_i12.b1 MSMg01no260_i12.b1 CHROMAT_FILE:
MSMg01no260_i12.b1 PHD_FILE: MSMg01no260_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:39 2005
(318 letters)
>mm_chr1_126080859_126081577
Length = 719
Score = 559 bits (289), Expect = e-164
Identities = 307/317 (96%), Gaps = 9/317 (2%)
Strand = Plus / Minus
Query: 4 ggaattcattagtttc-ccttaaacctcaaaattcaaatgagtatttgataaactgtgtt 62
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggaattcattagtttcacattaaacctcaaaattcaaatgagtatttgataaactgtgtt 418
Query: 63 ctagcagctgctca----cccctgatttgaaagtaactcatttcaattgctagttgaact 118
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctagcagctgctcaaggg----tgatttgaaagtaactcatttcaattgctagttgaact 362
Query: 119 gttgtaatatccatcattcatatttccaagatttaatttaacagatttacattagaagaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgtaatatccatcattcatatttccaagatttaatttaacagatttacattagaagaa 302
Query: 179 aacaactggaataatttattaaagaattctatccaagaataaaaatttaaatagatctta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacaactggaataatttattaaagaattctatccaagaataaaaatttaaatagatctta 242
Query: 239 ttgtcaatccacttataggggaatttttcatcattctgtaattaaatattttatatattt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtcaatccacttataggggaatttttcatcattctgtaattaaatattttatatattt 182
Query: 299 cactgtcataaacatta 315
|||||||||||||||||
Sbjct: 181 cactgtcataaacatta 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_i12.g1 MSMg01no260_i12.g1 CHROMAT_FILE:
MSMg01no260_i12.g1 PHD_FILE: MSMg01no260_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:39 2005
(405 letters)
>mm_chr1_125906975_125907779
Length = 805
Score = 717 bits (371), Expect = 0.0
Identities = 392/399 (98%), Gaps = 2/399 (0%)
Strand = Plus / Plus
Query: 1 actttgaatctaaattgtgatatgatcaaagacaatataaatacatttgattcagatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgaatctaaattgtgatatgatcaaagacaatataaatacatttgattcagatttc 260
Query: 61 ctaataaaagaagaggcaaataattcagttgcaagtagactaaagccaaataattgcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaataaaagaagaggcaaataattcagttgcaagtagactaaagccaaataattgcaaa 320
Query: 121 agtattaataccagctgaattagatcatataaattccaagggcttttaatcagaaaaatg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtattaataccagctgaattaggtcatataaattccaagggcttttaatcagaaaaatg 380
Query: 181 taaagggaaccaattcactaagcaactgttactccaggtattttgtgataaactagggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaagggaaccaattcactaagcaactgttactccaggtattttgtgataaactagggga 440
Query: 241 aaatgtccttgtgatatttggtcatagaaagctgcttaatttatattcaacattctttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgtccttgtgatatttggtcatagaaagctgcttaatttatattcaacattctttac 500
Query: 301 ttttaaaatttttaacaaatattgaaaatatatcttctgcaacttaaatttgtgtgtgag 360
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 501 ttttaaaatttttaacaaatattgaaaatatatcttttgcaacttaaatttgtgtgtgtg 560
Query: 361 tgtgt-t-cgtgtatgtgaacatgtgtgtgtgtgtgtgt 397
||||| | |||||||||| |||||| |||||||||||||
Sbjct: 561 tgtgtgtacgtgtatgtgtacatgtatgtgtgtgtgtgt 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
