Query= MSMg01no260_o10.b1 MSMg01no260_o10.b1 CHROMAT_FILE:
MSMg01no260_o10.b1 PHD_FILE: MSMg01no260_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:08 2005
(320 letters)
>mm_chr1_49629871_49630590
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttaacttccagaaacttaattcatttggttgtgaaagacaagaaactatatg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaattcatttaacttcaagaaacttaattcatttggttgtgaaagacaagaaactatatg 650
Query: 65 agcacaagtaaatatcgatcagatatttgtaagaacaacaaaaagggaagaaaaggatga 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agcacaagtaaatat-gatcagatatttgtaagaacaacaaaaagggaagaaaaggatga 591
Query: 125 ttgaagaagcaatatcacatgttttctttgaaaaaatgcagtttgtacagaaatataaat 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 590 ttgaagaagcaatatcacatgttttctttgaaaaaatgcagtttgtaaagaaatataaat 531
Query: 185 atataaatataaccattgtaggcaatgtggagaaatgaccttcaaaatggtgagtgtgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atataaatataaccattgtaggcaatgtggagaaatgaccttcaaaatggtgagtgtgaa 471
Query: 245 tgcccaaaaatgtgtcatgggaagatacctacctgaaggactttgtgaggagcactgggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgcccaaaaatgtgtcatgggaagatacctacctgaaggactttgtgaggagcactgggc 411
Query: 305 ctacatgaaattaa 318
||||||||||||||
Sbjct: 410 ctacatgaaattaa 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_o10.g1 MSMg01no260_o10.g1 CHROMAT_FILE:
MSMg01no260_o10.g1 PHD_FILE: MSMg01no260_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:08 2005
(658 letters)
>mm_chr1_49468902_49469959
Length = 1058
Score = 1226 bits (634), Expect = 0.0
Identities = 652/658 (99%)
Strand = Plus / Plus
Query: 1 tgtttagctctgtaccccaattttaaatagtgttatttggttctctggagtctaacttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttagctctgtaccccaattttaaatagtgttatttggttctctggagtctaacttga 260
Query: 61 gttcttcatacattttggatgttagccctctatcagatgtaggattgaaaagatcttttt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gttcttcatacattttggatgttagccctctatcagatgtaggattggaaagatcttttt 320
Query: 121 ccaatctgtgggtttctgttttgtcttattggcagtacccttcattttacagaagctttt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ccaatctgtgggtttctgttttgtcttattggcagtacccttcatcttacagaagctttt 380
Query: 181 caattttatgaggtctcatttgtcaataggtgattttagagcataagccattggtgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caattttatgaggtctcatttgtcaataggtgattttagagcataagccattggtgtttt 440
Query: 241 gttcagaacattttctcctgagccatatgtttgaggttctttcccattttctcttctatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttcagaacattttctcctgagccatatgtttgaggttctttcccattttctcttctatt 500
Query: 301 agattcattgtgtctggtttaatatggagattttttgggaaggatcttcttgatttaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattcattgtgtctggtttaatatggagattttttgggaaggatcttcttgatttaata 560
Query: 361 agagaaagttgcaagattataaacacatatttaccattgtcattaaatatacccatggag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 agagaaagttgcaagattataaacacatatttaccattgtcattaaatatacacatggag 620
Query: 421 caaagaaagagtattgaattctatcttttccctatacattatttttcttttgccaatgtc 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 caaagaaagagtattgaattctatctgttccctatacattatttttcttttgccaatgtc 680
Query: 481 tacatctatacagcataatcatgaagaatgtataaaaagactgcattcaatctttaaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacatctatacagcataatcatgaagaatgtataaaaagactgcattcaatctttaaagc 740
Query: 541 taaaagaaataaagttgttttacttttttgtttttattttaaagtcaatttgcttttatt 600
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaaataaataaagttgtttttcttttttgtttttattttaaagtcaatttgcttttatt 800
Query: 601 tatttttgagaccattatttaatatgttttgcttattttacactcacaactcttccta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tatttttgagaccattatttaatatgttttgcttattttacactcacaactcttccta 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
