Query= MSMg01no261_d15.b1 MSMg01no261_d15.b1 CHROMAT_FILE:
MSMg01no261_d15.b1 PHD_FILE: MSMg01no261_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:34 2005
(320 letters)
>mm_chr1_149453924_149454643
Length = 720
Score = 530 bits (274), Expect = e-155
Identities = 307/318 (96%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaccttctttgcgtaaaaaactgaaata-aggatcttgcaagaagagatagca 62
|||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||
Sbjct: 204 ggaattcaaccttctttgggtaaaaacctgaaatacag-atcttgcaagaagagatagca 262
Query: 63 tattgactgggctttccccaacacaaagaaagcaatattttataatatttctggagattc 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tattgactgggctttcaaaaacacaaagaaagcaatattttataatatttctggagattc 322
Query: 123 ccaccatacatacggaatgtaaaaagtggtaagctgtcccaactatttcagtttgaaagg 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 323 tcaccatacatacggaatgtaaaaagtggtaagctgtcccaactatttcagtttgaacgg 382
Query: 183 agaagaaacatagaaaatctaataatagagatggaagggaaatttttcagagaaaagtga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agaagaaacatagaaaatctaataatagagatggaagggaaatttttcagagaaaagtga 442
Query: 243 atataagagcatgtcaagtgtagtgagtccttttctaggtaagtgtaatgctatgagaaa 302
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 443 atataagagcatgtcaagtgtagtgagttcttttctaggtaagtgtaatgcgatgagaaa 502
Query: 303 gaatgagtacatgactaa 320
||||||||||||||||||
Sbjct: 503 gaatgagtacatgactaa 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_d15.g1 MSMg01no261_d15.g1 CHROMAT_FILE:
MSMg01no261_d15.g1 PHD_FILE: MSMg01no261_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:34 2005
(567 letters)
>mm_chr1_149586969_149587935
Length = 967
Score = 948 bits (490), Expect = 0.0
Identities = 514/522 (98%)
Strand = Plus / Minus
Query: 46 agcagccatctccgtggtcctctggctcctgcaatctattcctaacctaagcctctctac 105
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 967 agcagccatctccgtgatcctctggctcttgcaatctattcctaacctaagcctctctac 908
Query: 106 aaacttctctgagccttaagtaggaaagatgatttgtatacatatcattttggactaagc 165
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 907 aaagttctctgagccttaagtaggaaagatgttttgtatacatatcattttggactaagc 848
Query: 166 tctgcagctctgactttatattggttgtggattttgtaataatttttgttgccatgaaaa 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 tctgcagctctgactttatattggttgtggattttgtaataatttttgttgccatgaaaa 788
Query: 226 atttgcacaatgaggggagatgctatgttgagaaagctatgaacattaggctatcctgag 285
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 attttcacaatgaggggagatgctatgttgagaaagctatgaacattaggctatcctgag 728
Query: 286 tagtggtttccagggtatacctttaatttataaagaatgaagagaatgtaacccttgctt 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tagtggtttccagggtatacctttaatttataaagaatgaagagaatgtaacccttgctt 668
Query: 346 ttcacggtcagttgatacgaggactgcccttgatactctgccttgatatagtttttctat 405
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttcatggtcagttgatacgaggactgcccttgatactctgccttgatatagtttttctat 608
Query: 406 ttaggaattctactttatcatatttttttccttaactgtggctttctccattaatgtcct 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttaggaattctactttatcatatttttttccttaactgtggctttctccattaatgtcct 548
Query: 466 agtattttaaattacttttcccttcacttcttttaaaaaggatgatggatccatattttt 525
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agtattttaaattatttttcccttcacttcttttaaaaaggatgatggatccatattttt 488
Query: 526 tattatgctatattttaataacagcaggtattgaacaagtca 567
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 487 tattatgctatattataataacagcaggtattgaacaagtca 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
