Query= MSMg01no263_m07.b1 MSMg01no263_m07.b1 CHROMAT_FILE:
MSMg01no263_m07.b1 PHD_FILE: MSMg01no263_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:46 2005
(180 letters)
>mm_chr1_187242211_187242790
Length = 580
Score = 306 bits (158), Expect = 7e-88
Identities = 175/182 (96%), Gaps = 4/182 (2%)
Strand = Plus / Minus
Query: 1 ccacatgaggcttccttagtataaacaaacaccgcaagatagc--tatcccctaacataa 58
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 380 ccacatgaggcttccttagtataaacaaacaccgcaagatagctgtat--tctaacataa 323
Query: 59 gaaccagtttccacaacacttttagggaggcaaggcacagcgctgtgtattcaaagacag 118
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 322 gaaccagtttccacaacacttttagggaggcaaggcacagtgctgtgtattcaaagacag 263
Query: 119 gccaagcacacactaagtgttcacccaccaagctattctccttgaaccaccacagaaagt 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 262 gccaagcacacactaagtgttcacccaccaagctattctccttgaaccaccacagagagt 203
Query: 179 ag 180
||
Sbjct: 202 ag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_m07.g1 MSMg01no263_m07.g1 CHROMAT_FILE:
MSMg01no263_m07.g1 PHD_FILE: MSMg01no263_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:47 2005
(342 letters)
>mm_chr1_187118155_187118895
Length = 741
Score = 540 bits (279), Expect = e-158
Identities = 303/311 (97%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 32 acacacacacacacacacacacacacacacacacacattaaatgttgaaaaaaaaagcaa 91
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 232 acacacacacacacacacacacacacaaacacacacattaaatgttg-aaaaaaaagcaa 290
Query: 92 gaatccagcaaagacatcaaaacacttcatgccatggtcatcgtaaactgtgtgaacgta 151
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 291 aaatccagcaaagacatcaaaacacttcatgtcatggtcatcgtaaactgtgtgaacgta 350
Query: 152 gtggtgcactttctggggtacaatagggatgatttctagtgagcgaggtctgttcactgg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gtggtgcactttctggggtacaatagggatgatttctagtgagcgaggtctgttcactgg 410
Query: 212 aagttatgggaaaggtgctgatgctgctgtttgccaaagcctgctactgtgcactgacct 271
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 411 aagttatgggagaggtgctgatgttgctgtttgccaaagcctgctactgtgcactgacct 470
Query: 272 ttgtcgcaaaatcctgaattaagtgcagcatatactggtctatgacgtacatattcttca 331
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 471 ttgtcgcaaaatcctgaattaagtgcagcatatactggtctatgacatacatattcttca 530
Query: 332 caggaacagaa 342
| |||||||||
Sbjct: 531 cgggaacagaa 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
