Query= MSMg01no264_l13.b1 MSMg01no264_l13.b1 CHROMAT_FILE:
MSMg01no264_l13.b1 PHD_FILE: MSMg01no264_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:59 2005
(334 letters)
>mm_chr1_76443628_76444362
Length = 735
Score = 601 bits (311), Expect = e-176
Identities = 329/335 (98%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 1 acccattgcaggtggctttggtcaatatcaatgaccactttgatgtctttatgaagactg 60
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 acccattgcagctggctttggtcaatatcagtgaccactttgatgtctttatgaagactg 260
Query: 61 agttaggaaacact-ctagtgttagttaagagatattgctccgaagatcccatgcgttag 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttagaaaacacttctagtgttagttaagagatattgctccgaagatcccatgcgttag 320
Query: 120 aggcaagacatctgtgtctctaaagccaaaagctatgtgcctaagccctgacaaagaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggcaagacatctgtgtctctaaagccaaaagctatgtgcctaagccctgacaaagaaag 380
Query: 180 caagccatacacatgacctggagcagcttgaattctttcttaatgaagtttccatcaata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagccatacacatgacctggagcagcttgaattctttcttaatgaagtttccatcaacg 440
Query: 240 tgaagggaacaaggtcagcagacaatagccagtggcccaaactcatcttagagctttccg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaagggaacaaggtcagcagacaatagccagtggcccaaactcatcttagagctttccg 500
Query: 300 ggaaaatagctgcacgcatatttatatattgccca 334
|||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaaaatagctgcacgcatatttatatattgccca 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 735
Length adjustment: 9
Effective length of query: 325
Effective length of database: 726
Effective search space: 235950
Effective search space used: 235950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_l13.g1 MSMg01no264_l13.g1 CHROMAT_FILE:
MSMg01no264_l13.g1 PHD_FILE: MSMg01no264_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:59 2005
(238 letters)
>mm_chr1_76561896_76562533
Length = 638
Score = 429 bits (222), Expect = e-125
Identities = 234/238 (98%)
Strand = Plus / Minus
Query: 1 ggggctggagaagaacactgagtcccccaatttatatactataatggaggagaagagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggggctggagaagaacactgagtcccccaatttatatactataatggaggagaagagaaa 379
Query: 61 aaatggctagatcattagcagaccctgcaacccttgagtatctagaaactaatgtctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 378 aaatggctagatcattagcagaccctgcaacccttgagtatctagaaactaatatctttg 319
Query: 121 tagtataataagcatattaagttcctatatgtaagtaggaaagattgtcaaaaccatatt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 318 tagtataataagcatattaagttcctatatgtaattaggaaagattgtcaaaaccatatt 259
Query: 181 aaggaagagagtaagattattatctaagtaaaacactgttttatatactacctatgat 238
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaggaagagagtaagaaaattatctaagtaaaacactgttttatatactacctatgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
