Query= MSMg01no265_h22.b1 MSMg01no265_h22.b1 CHROMAT_FILE:
MSMg01no265_h22.b1 PHD_FILE: MSMg01no265_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:59 2005
(318 letters)
>mm_chr1_160472784_160473501
Length = 718
Score = 551 bits (285), Expect = e-161
Identities = 306/313 (97%), Gaps = 2/313 (0%)
Strand = Plus / Plus
Query: 5 gaattccatagactgtgtcatttataaaccatagaagattttttttt-cagtatagaggc 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattccatagactgtgtcatttataaaccatagaagatttttttttccagtatagaggc 264
Query: 64 tgagaagtctataagcccatggtagtagctggtaaggaactttttatacataataacaca 123
||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 tga-aagtctaaaagcacatggtagtagatggtaaggaactttttatacataataacaca 323
Query: 124 gaggaaggacaagtgaccacatcatggagagtaaaataaagcgaaatcatagttataaga 183
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 324 gaggaaggacaagtgaccacatcatggagagtaaaataaagtgaaatcatatttataaga 383
Query: 184 aatcttcctgtgataactcatccacacctacgagaacatagcgaccctcatgacctaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatcttcctgtgataactcatccacacctacgagaacatagcgaccctcatgacctaagc 443
Query: 244 tcttgcttaaggcccccacctgttatcatcatggcaaaggtaattaaatttcaactttag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcttgcttaaggcccccacctgttatcatcatggcaaaggtaattaaatttcaactttag 503
Query: 304 ctttgtagggggg 316
|||||||||||||
Sbjct: 504 ctttgtagggggg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_h22.g1 MSMg01no265_h22.g1 CHROMAT_FILE:
MSMg01no265_h22.g1 PHD_FILE: MSMg01no265_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:59 2005
(289 letters)
>mm_chr1_160619736_160620424
Length = 689
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 4 tcaagacaagctggctgaatgtacattgggtcattgttagtcattctggtcccatgaggt 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcaaggcaagctggctgaatgtacattgggtcattgttagtcattctggtcccatgaggt 430
Query: 64 tgtttctaacaggctaggcttcctagtagctagttcaccgtatcatcatccttgggcagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtttctaacaggctaggcttcctagtagctagttcaccgtatcatcatccttgggcagt 370
Query: 124 gtgtgcaaatggagcctcagtccttatgtgcgatcatcagatgttcaggtctctccagag 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 369 gtgtgcaaatggagcctcagtccttatgtgcaatcatcagatgttcaggtctctccagag 310
Query: 184 gctctgttgctcttcagtaactggcagagttgggtgggcaggcagtgacaatgacagagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctctgttgctcttcagtaactggcagagttgggtgggcaggcagtgacaatgacagagt 250
Query: 244 actgatgattttcatcagagaataggctgtcaaaatttacaatata 289
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 actgatgattttcatcagagaataggctgtcaaaatttacaatata 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
