Query= MSMg01no265_m02.b1 MSMg01no265_m02.b1 CHROMAT_FILE:
MSMg01no265_m02.b1 PHD_FILE: MSMg01no265_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:21 2005
(318 letters)
>mm_chr1_166750060_166750777
Length = 718
Score = 555 bits (287), Expect = e-162
Identities = 308/315 (97%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttttgtttgccattattatcatggagtgaaagctagtcaactcatctcttaa 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcatttttgtgtgacattattatcatggagtgaaagctagtcaactcatctcttaa 459
Query: 65 cttctgaatttctctc-tacttttttatggattaatggagagataacacaagagccatat 123
|||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 458 cttctgcatttctc-catactttttcatggattaatggagagataacacaagagccatat 400
Query: 124 gatgatcttgtctacaggaattttttgactcttcttttcttatggtttcagtgtccttgg 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gatgatcttatctacaggaattttttgactcttcttttcttatggtttcagtgtccttgg 340
Query: 184 gagaggcccagaaaggaatgaggggagaagcagggccgaagtgcaacttagtgcttttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gagaggcccagaaaggaatgaggggagaagcagggccgaagtgcaacttagtgcttttcc 280
Query: 244 ttcttgagttacttaggtcgtctttttactccagaaatattctgacttcatcacataatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttcttgagttacttaggtcgtctttttactccagaaatattctgacttcatcacataatg 220
Query: 304 atttcctcccttttc 318
|||||||||||||||
Sbjct: 219 atttcctcccttttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_m02.g1 MSMg01no265_m02.g1 CHROMAT_FILE:
MSMg01no265_m02.g1 PHD_FILE: MSMg01no265_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:21 2005
(241 letters)
>mm_chr1_166572885_166573525
Length = 641
Score = 406 bits (210), Expect = e-118
Identities = 231/238 (97%)
Strand = Plus / Plus
Query: 1 cattgcagatgtctgctaacaagagagaaggggacaatgcttcaggggtcatgatgttga 60
||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||||
Sbjct: 201 cattgcagatgtctgctaataagagagaaggggacaatgcctctggggtggtgatgttga 260
Query: 61 gggttcagaggatttatctttccatcaccatccatcggcatccatcgccatccatctgtc 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gggttcagaggatttatctttccatcaccatccattggcatccatcgccatccatctgtc 320
Query: 121 agactttgagtaaattctaaactcatctgagtctcaacgttctgtgcttctaatgcaaag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agactttgagcaaattctaaactcatctgagtctcaacgttctgtgcttctaatgcaaag 380
Query: 181 atttggaatcacaaacttcttcaaaggaagacagatttcctttgaaggttggatatga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttggaatcacaaacttcttcaaaggaagacagatttcctttgaaggttggatatga 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
