Query= MSMg01no266_c12.b1 MSMg01no266_c12.b1 CHROMAT_FILE:
MSMg01no266_c12.b1 PHD_FILE: MSMg01no266_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:52 2005
(314 letters)
>mm_chr1_148389238_148389947
Length = 710
Score = 549 bits (284), Expect = e-161
Identities = 302/310 (97%), Gaps = 4/310 (1%)
Strand = Plus / Plus
Query: 5 gaattcaatatagaaaatgaagtgtagagtgtgagaatatactggaatgtaaatatgata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatatagaaaatgaagtgtagagtgtgagaatatactggaatgtaaatatgata 264
Query: 65 ataattaaaatgttcttgtttcagtttgaaaatctccagtatttgtaaatgatataatat 124
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataatgaaaatgtttttgtttcagtttgaaaatctccagtatttgtaaatgatataatat 324
Query: 125 gttggtagaactctatagcatatgcaagctatttgaattattcctaatacttttatgaat 184
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttggtagaactctatagcatgtgcaagctatttgaattattcctaatacttttatgaat 384
Query: 185 aataatctctatgactgttgaatttttaaacaatttaatgatacagaaacaaattttttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aataatctctatgactgttgaatttttaaacaatttaatgatacagaaacaaattttttc 444
Query: 245 tgttttttttttttggtaattagagtgtaatgatcttttgagttctagattcaaaatatg 304
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 t----tttttttttggtaattagagtgtaatgatcttttgagttctagattcaaaatatg 500
Query: 305 caacatctct 314
||||| ||||
Sbjct: 501 caacacctct 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 710
Length adjustment: 9
Effective length of query: 305
Effective length of database: 701
Effective search space: 213805
Effective search space used: 213805
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_c12.g1 MSMg01no266_c12.g1 CHROMAT_FILE:
MSMg01no266_c12.g1 PHD_FILE: MSMg01no266_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:52 2005
(287 letters)
>mm_chr1_148568261_148568947
Length = 687
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Minus
Query: 1 aaaactagggactaatttttgttatatccctaataaaagtacactgtgcataatttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaaactagggactaatttttgttatatccctaataaaagtacactgtgcataatttaaat 512
Query: 61 tatgtttatgtatttaattttaaaaaggaatgattgtatatcttctggcacttgtataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tatgtttatgtatttaattttaaaaaggaatgattgtatatcttctggcacttgtataaa 452
Query: 121 tcacaattgttttctaggtatgattacatctcagatgaggtttcaaactttaggagcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcacaattgttttctaggtatgattacatctcagatgaggtttcaaactttaggagcaaa 392
Query: 181 ggtgaacttgtttgagagagagctaaattgctttgggcacttttagttgtgtgaaggtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggtgaacttgtttgagagagagctaaattgctttgggcacttttagttgtgtgaaggtga 332
Query: 241 aagtccatttttcatacacctaactaaaacaggctcgaacatttc 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aagtccatttttcatacacctaactaaaacaggctcgaacatttc 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
