Query= MSMg01no266_o14.b1 MSMg01no266_o14.b1 CHROMAT_FILE:
MSMg01no266_o14.b1 PHD_FILE: MSMg01no266_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:49 2005
(679 letters)
>mm_chr1_142605168_142606246
Length = 1079
Score = 1305 bits (675), Expect = 0.0
Identities = 678/679 (99%)
Strand = Plus / Plus
Query: 1 aactgagaaatttctcatatctggtaaattcctgctttgttgctagttctccatgacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactgagaaatttctcatatctggtaaattcctgctttgttgctagttctccatgacagt 260
Query: 61 tatgatcaggaattgagcagaataaactataggggtaaacagctaaaagtgtttaccttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 tatgatcaggaattgagcagaataaactataggggtaaacagctaaaagtttttaccttt 320
Query: 121 atgtttccatctgattaatattattgagcatgaaatattcagtgctcattccacggctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtttccatctgattaatattattgagcatgaaatattcagtgctcattccacggctat 380
Query: 181 caaacactaattggtactaattcttatagcccatgacaaaccttatcaataataatcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaacactaattggtactaattcttatagcccatgacaaaccttatcaataataatcaca 440
Query: 241 tcaggacattttagattaaaacagtccacagcagtattagatcatctttttgtgttacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaggacattttagattaaaacagtccacagcagtattagatcatctttttgtgttacat 500
Query: 301 cctaaccatatttatccagcaaagaatcactgcaactttttcagtgtgaaatccacaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctaaccatatttatccagcaaagaatcactgcaactttttcagtgtgaaatccacaata 560
Query: 361 gcacatagcaagcatagtaaacactgcagatttattaaaacttagtccagccttaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcacatagcaagcatagtaaacactgcagatttattaaaacttagtccagccttaatttt 620
Query: 421 ttgtgaaaatagctgttattttgttacctccaataactgattttacatggcattttttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtgaaaatagctgttattttgttacctccaataactgattttacatggcattttttct 680
Query: 481 aggctcagtcttacaagaaaaattgtaggaacaaagccatttaaaatttacacacatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggctcagtcttacaagaaaaattgtaggaacaaagccatttaaaatttacacacatggt 740
Query: 541 tctacatttcctgcaaggatatgctgaaaaaagtaatagattgcatttttgctttccacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctacatttcctgcaaggatatgctgaaaaaagtaatagattgcatttttgctttccacc 800
Query: 601 ataaagttcctaaaattgagtgttaggaattaagtgaaaccaagtagcttatactgtagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ataaagttcctaaaattgagtgttaggaattaagtgaaaccaagtagcttatactgtagc 860
Query: 661 aaacatttcaaccgaatgg 679
|||||||||||||||||||
Sbjct: 861 aaacatttcaaccgaatgg 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_o14.g1 MSMg01no266_o14.g1 CHROMAT_FILE:
MSMg01no266_o14.g1 PHD_FILE: MSMg01no266_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:49 2005
(291 letters)
>mm_chr1_142737365_142738057
Length = 693
Score = 520 bits (269), Expect = e-152
Identities = 285/291 (97%), Gaps = 2/291 (0%)
Strand = Plus / Minus
Query: 1 cacatgagtaggctcgaaactgatagcaatgctctgaaatcacattggtgtatcagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cacatgagtaggctcgaaactgatagcaatgctctgaaatcacattggtgtatcagcagc 432
Query: 61 taattgctcagaggttctgacttatatgtaggaatgaaggcaatctaaataacttaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 taattgctcagaggttctgacttatatgtaggaatgaaggcaatctaaataacttaatgc 372
Query: 121 aaaagaaaaagggattatggcaagatgagcataaagagataaatggtcttaattgtgtcc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaaagaaaaaggtattatggcaagatgagcataaagagataaatggtcttaattgtgtcc 312
Query: 181 tgtctggataccttgcaaattccaccaataagtgttctgagggccttttgatgtgggcac 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 311 tgtctggataccttgaaaattccaccaataagtgttctgagggccttttgatgtgggaac 252
Query: 241 aaatttccatcagcaatgtgactt--atatcaggaattcataagtatcatg 289
||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 251 aaatttccatcagcaatgtgatttttatatcaggaattcataagtatcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
