Query= MSMg01no267_c01.b1 MSMg01no267_c01.b1 CHROMAT_FILE:
MSMg01no267_c01.b1 PHD_FILE: MSMg01no267_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:06 2005
(692 letters)
>mm_chr1_124041449_124042539
Length = 1091
Score = 1033 bits (534), Expect = 0.0
Identities = 604/628 (96%), Gaps = 5/628 (0%)
Strand = Plus / Plus
Query: 68 gcataactgggattttaaagaaaccaaaattcttactgcata--gtatggttcagagaga 125
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 266 gcataactgggattttaaagaaaccaaaattcttactgcatactatatggttcagagaga 325
Query: 126 ttatattgtagaggctggtaaatctgggtcaaactaggtcttaccatgtattagttatgt 185
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 326 ttatattgtaaaggctggtaaatctgggtcaaacttggtcttaccatgtattagttatgt 385
Query: 186 gacattggttaggtcaggtacatatcctgagccttgactttaccttctgtagttctggac 245
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 386 gacattggttaggtcaggtacatgtcctgagccttgactttaccttctgtagttctggac 445
Query: 246 actattaagcatgagagtttttgtaagtgtaataacagatgttgactcagcagagaaagg 305
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 446 actattaagcatgagagtttttgtaagagtaataacagatggagactcagcagagaaagg 505
Query: 306 gacaagtttaagaaaacttactccacttcttgattcctctgtctttcctataagagcatc 365
||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 506 gacaa-tttaagaaaacaaactccacttcttgattcctctgcctttcctataagagcatc 564
Query: 366 cctttcagaataattttcactctgtatgttctgttgtctggcaacattttttctttcagt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctttcagaataattttcactctgtatgttctgttgtctggcaacattttttctttcagt 624
Query: 426 ccctttacctctaacttaatgtctttgtggcactatcatagtcccaaaatggccctcaaa 485
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 625 ctttttacctctaacttaatgtctttgtagcactatcatagtcccaaaatggccctcaaa 684
Query: 486 aactacctttgtaagaaataatttagcctgtgactttatcttattgaaaagtattatttc 545
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 685 aactacctttgtaagaaataatttagcctgtgactttatcttattgaaaaatattatttc 744
Query: 546 cacagaatatgcatgaataaaattctggataagttatttaaaaatattaatatatttcta 605
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 745 cacagaatatgcatgaataaaattttggataagttatttaaaaatattaatacatttcta 804
Query: 606 gtgaattgttgattcaggaatgaatcatataaaaccaaataattggaccatgaaaatcaa 665
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 805 gtgaattgttgattcaggaatgaatcaaataaaaccaaataattggacaatgaaaatcaa 864
Query: 666 agcatagttaca-gtttggaaagcaatt 692
||||||||| || || ||||||||||||
Sbjct: 865 agcatagtt-caagtatggaaagcaatt 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1091
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1081
Effective search space: 737242
Effective search space used: 737242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_c01.g1 MSMg01no267_c01.g1 CHROMAT_FILE:
MSMg01no267_c01.g1 PHD_FILE: MSMg01no267_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:06 2005
(661 letters)
>mm_chr1_124140656_124141716
Length = 1061
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%)
Strand = Plus / Minus
Query: 211 tagagaactgggacagctgttaagagcaatttctgctcagtgtggatcctggcactgttg 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tagagaactgggacagctgttaagagcaatttctgctcagtgtggatcctggcactgttg 1002
Query: 271 tcagacctgtaactccagctgcaaggggtatgagtctctcttctagcctctatgggcaca 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tcagacctgtaactccagctgcaaggggtatgagtctctcttctagcctctatgggcaca 942
Query: 331 ttcacacagatgtacacactgagatgtacacacacacacacacacacacacacacacaca 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ttcacacagatgtacacactgagatgtacacacacacacacacacacacacacacacaca 882
Query: 391 cacacacacacacacattctgtgaccctgatatttattaggagtgctgtgttttatctag 450
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 cacacacacacacacatgccgtgaccctgatatttattaggagtgctgtgttttatctag 822
Query: 451 tctttccatgggcatctgcagaaatgctacttggctgatatgtctggcagcagtagagtt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tctttccatgggcatctgcagaaatgctacttggctgatatgtctggcagcagtagagtt 762
Query: 511 aggttgtacacatctcaaactgtgctgagctaagtctcagggaagcacaggaagaccctg 570
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aggttctacacatctcaaactgtgctgagctaagtctcagggaagcacaggaagaccctg 702
Query: 571 tccttttctctgtcagttttgattgtactgttataactatgactattgctgttgtgtctg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tccttttctctgtcagttttgattgtactgttataactatgactattgctgttgtgtctg 642
Query: 631 taactccagcatattgattaacgcctatgga 661
|||||||||||||||||||||||||||||||
Sbjct: 641 taactccagcatattgattaacgcctatgga 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
