Query= MSMg01no267_e14.b1 MSMg01no267_e14.b1 CHROMAT_FILE:
MSMg01no267_e14.b1 PHD_FILE: MSMg01no267_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:18 2005
(307 letters)
>mm_chr1_8083442_8084148
Length = 707
Score = 578 bits (299), Expect = e-169
Identities = 305/307 (99%)
Strand = Plus / Minus
Query: 1 catgagctcaagaatacataaataagtgttagagctgttatttacaggactcctcaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 catgagctcaagaatacataaataagtgttagagctgttatttacaggactcctcaactc 617
Query: 61 tgcaaaatatgatgatgtaataggaattgtattagtgggttcacagacctgaaagaacag 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgcaaaatatgatgatgcaataggaattgtattagtgggttcacagacctgaaagaacag 557
Query: 121 cggaagcttcattaatgagttagcttcatcataaagatattaaggaaggagacatgaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cggaagcttcattaatgagttagcttcatcataaagatattaaggaaggagacatgaatt 497
Query: 181 gctcaacagacaaaaaaatactgggtcacaaaaaagaaagggatactctaaaacacggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctcaacagacaaaaaaatactgggtcacaaaaaagaaagggatactctaaaacacggct 437
Query: 241 cagatagatggttatataatattaggggcaaattagcagtctccctcatggaagccatca 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 436 cagatagatggttatataatattaggggcaaaatagcagtctccctcatggaagccatca 377
Query: 301 acaccta 307
|||||||
Sbjct: 376 acaccta 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_e14.g1 MSMg01no267_e14.g1 CHROMAT_FILE:
MSMg01no267_e14.g1 PHD_FILE: MSMg01no267_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:18 2005
(649 letters)
>mm_chr1_7915184_7916232
Length = 1049
Score = 1216 bits (629), Expect = 0.0
Identities = 644/649 (99%)
Strand = Plus / Plus
Query: 1 cttatactaatcagaaggattagtaacttgctatctttggggatgatttcaacaagctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttatactaatcagaaggattagtaacttgctatctttggggatgatttcaacaagctat 260
Query: 61 tataattagaagaacctggcaccagtagatgtagtggttatatttctccatgatagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataattagaagaacctggcaccagtagatgtagtggttatatttctccatgatagataa 320
Query: 121 atattataaaaaagacatttcatatccaagtgataaaggttatgctaatgattaagattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattataaaaaagacatttcatatccaagtgataaaggttatgctaatgattaagattg 380
Query: 181 tagctcattggtagaacctagcatttagatgctttgacttccatctccaagtccacaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctcattggtagaacctagcatttagatgctttgacttccatctccaagtccacaaaa 440
Query: 241 cagagtactgtaataaagctgctgaatctcaagttaggccagaatattctgccctttccc 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 cagagtactgtaataaagctgctgaatctcaagttaggccagaatatgctgccctttccc 500
Query: 301 ctataatcttttgaatgttagtcaaggaagaaagggccaaaaaggtggttcagtggttaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 ctataatcttttgaatgttagtcaaggaagaaagggccaaaaaggtggttcagtggataa 560
Query: 361 agtgactttccagcaaacatgagaacgcaagtcccatgcaaatatgtctgatgaagtagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgactttccagcaaacatgagaacgcaagtcccatgcaaatatgtctgatgaagtagt 620
Query: 421 actggttagtaactatagtgaccatttgtaaaaaggggaatcagagcaagagaatatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actggttagtaactatagtgaccatttgtaaaaaggggaatcagagcaagagaatatcta 680
Query: 481 gaaggccatagagagctagccaggcataggcagctgtgaacacaaaatacaccatgctca 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 gaaggccatagagagctagccaggcataggcagctgtgaacacaaaacacaccatgctca 740
Query: 541 taaaaagaaatggaagatgaggactgacaccaatagttgtcatctgaccttcacaaatac 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaaaataaatggaagatgaggactgacaccaatagttgtcatctgaccttcacaaatac 800
Query: 601 accttgataagtgtttacttagataatgcatacacacatacacatcata 649
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 801 accttgataagtgtttacttagataatgcacacacacatacacatcata 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
