TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGCCCTATCCTGAGACCATAGCTCCAGCTTTTTACCCTGTGTAGCC
CTAGATATATTCAGCAAAAGATGGTAGGAAGCAGGAAATATTGCAGAAAT
CTACCAAGACAGATTCCCTTTTCAAAAATTGATTTACGACATCGTGGTGG
TAATGTAGAAATGTCATGGCCATGTAGCAAAATGCATCTTCTCTGGAACC
TAGTGGTGCTGTGGAAGATGAGTCACAGCTTAAGTCCTCTAAAATGAATG
ATGTGGAGCTGAAGATGCCTACCAAGACCAACTATGGACTCCCGAGTTAA
TGATAAAATTCNCATTCNGGCNTACCATTCCAGGTGGNTTTGGTCAATAT
CAATGACCACTTTGATGTCTTTAAGAAAAATAGAATTAGGAAACACTCTA
GTGTTAGTTAAGAGATATTGCTCCGAAGATCCCATGCGTTAGAGGCAAGA
CATCTGTGTCTCTAAAGCCAAAAGCTATGTGCCTAAGCCCTGACAAAGAA
AGCAAGCCATACACATGACCTGGAGCAGCTTGAATTCTTTCTTAATGAAG
TTTCCATCAATATGAAGGGAACAAGGTCAGCAGACAATAGCCAGTGGCCC
AAACTCATCTTAGAGCTTTCCGGGAAAATAGCTGCACGCATATTTATATA
TTGCCCATGGCTGCCTTTGTGTTTCAATGGCACN

CGAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGGGGTATACTATAAATAGAGAAA
TTATTACAGCTAGACTAATAAGACCCATGTGGGGCTGGAGAAGAACACTG
AGTCCCCCAATTTATATACTATAATGGAGGAGAAGAGAAAAAATGGCTAG
ATCATTAGCAGACCCTGCAACCCTTGAGTATCTAGAAACTAATGTCTTTG
TAGTATAATAAGCATATTAAGTTCCTATATGTAAGTAGGAAAGATTGTCA
AAACCATATTAAGGAAGAGAGTAAGAAAATTATCTAAGTAAAACACTGTT
TTATATACTACCTATGATTCAAGATAAATGTAATTGATAAATCTAAATGC
CACATTTTACCAGTGTTTGCTTCTAATCCTAGAAAATAATTAGCTGTTTT
TATTTAATAAAAGTATAGGGTATGTTTATTTTTGGAGAAATATCAAGCCA
TCTGGAAGCTTTTAAATGTTGAATGAAATTTTTTTTATTGAATCATATTT
GATATTGCTGATGACTTCGTTTATTTAATCTAAGTATGGACAAGTTTGCT
ACATTTGTGTCTTCAGGCTTGACAGTTTCCATTCTGAGAATGTCCTAAAG
CAGGAGAAAATGCTGTTGGCACCTTAACTACATCGGTAGCATCATTAAAT
AGTCTCCTGTTTCCAN

Query= MSMg01no267_o08.b1 MSMg01no267_o08.b1 CHROMAT_FILE:
MSMg01no267_o08.b1 PHD_FILE: MSMg01no267_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:03 2005
         (315 letters)



>mm_chr1_76443298_76444012
          Length = 715

 Score =  553 bits (286), Expect = e-162
 Identities = 304/310 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgccctatcctgagaccatagctccagctttttaccctgtgtagccctagatat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgccctatcctgagaccatagctccagctttttaccctgtgtagccctagatat 264

                                                                       
Query: 65  attcagcaaaagatggtaggaagcaggaaatattgcagaaatctaccaagacagattccc 124
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 attcagcaaaagatggtaggaagcaggaaatattgcagaaatctaccaaggcagattccc 324

                                                                       
Query: 125 ttttcaaaaattgatttacgacatcgtggtggtaatgtagaaatgtcatggccatgtagc 184
           |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 325 ttttcaaaaattgatttaagacattgtggtggtaatgtaaaaatgtcatggccatgtagc 384

                                                                       
Query: 185 aaaatgcatcttctctggaacctagtggtgctgtggaagatgagtcacagcttaagtcct 244
           |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aaaatgcatcttctctggaagctagtggtgctgtggaagatgagtcacggcttaagtcct 444

                                                                       
Query: 245 ctaaaatgaatgatgtggagctgaagatgcctaccaagaccaactatggactcccgagtt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctaaaatgaatgatgtggagctgaagatgcctaccaagaccaactatggactcccgagtt 504

                     
Query: 305 aatgataaaa 314
           ||||||||||
Sbjct: 505 aatgataaaa 514


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space:   216036
Effective search space used:   216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no267_o08.g1 MSMg01no267_o08.g1 CHROMAT_FILE:
MSMg01no267_o08.g1 PHD_FILE: MSMg01no267_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:04 2005
         (640 letters)



>mm_chr1_76561549_76562588
          Length = 1040

 Score = 1181 bits (611), Expect = 0.0
 Identities = 632/639 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggggtatactataaatagagaaattattacagctagactaataagacccatgtggggct 60
           |||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||
Sbjct: 839 tggggtatactataaatagagaaattattacagctagactaaaaagaaaaatgtggggct 780

                                                                       
Query: 61  ggagaagaacactgagtcccccaatttatatactataatggaggagaagagaaaaaatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggagaagaacactgagtcccccaatttatatactataatggaggagaagagaaaaaatgg 720

                                                                       
Query: 121 ctagatcattagcagaccctgcaacccttgagtatctagaaactaatgtctttgtagtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 719 ctagatcattagcagaccctgcaacccttgagtatctagaaactaatatctttgtagtat 660

                                                                       
Query: 181 aataagcatattaagttcctatatgtaagtaggaaagattgtcaaaaccatattaaggaa 240
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 659 aataagcatattaagttcctatatgtaattaggaaagattgtcaaaaccatattaaggaa 600

                                                                       
Query: 241 gagagtaagaaaattatctaagtaaaacactgttttatatactacctatgattcaagata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gagagtaagaaaattatctaagtaaaacactgttttatatactacctatgattcaagata 540

                                                                       
Query: 301 aatgtaattgataaatctaaatgccacattttaccagtgtttgcttctaatcctagaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aatgtaattgataaatctaaatgccacattttaccagtgtttgcttctaatcctagaaaa 480

                                                                       
Query: 361 taattagctgtttttatttaataaaagtatagggtatgtttatttttggagaaatatcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taattagctgtttttatttaataaaagtatagggtatgtttatttttggagaaatatcaa 420

                                                                       
Query: 421 gccatctggaagcttttaaatgttgaatgaaattttttttattgaatcatatttgatatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gccatctggaagcttttaaatgttgaatgaaattttttttattgaatcatatttgatatt 360

                                                                       
Query: 481 gctgatgacttcgtttatttaatctaagtatggacaagtttgctacatttgtgtcttcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gctgatgacttcgtttatttaatctaagtatggacaagtttgctacatttgtgtcttcag 300

                                                                       
Query: 541 gcttgacagtttccattctgagaatgtcctaaagcaggagaaaatgctgttggcacctta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcttgacagtttccattctgagaatgtcctaaagcaggagaaaatgctgttggcacctta 240

                                                  
Query: 601 actacatcggtagcatcattaaatagtctcctgtttcca 639
           |||||||||||| ||||||||||||||||||||||||||
Sbjct: 239 actacatcggtaacatcattaaatagtctcctgtttcca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)