Query= MSMg01no267_o24.b1 MSMg01no267_o24.b1 CHROMAT_FILE:
MSMg01no267_o24.b1 PHD_FILE: MSMg01no267_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:07 2005
(325 letters)
>mm_chr1_177572532_177573256
Length = 725
Score = 571 bits (295), Expect = e-167
Identities = 314/321 (97%), Gaps = 4/321 (1%)
Strand = Plus / Plus
Query: 7 gaattcattctgatctccc--ctgtgtctgttcctttggcttgatttgtgaagacagggc 64
||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcattctga-c-cccatctgtgtctgttcctttggcttgatttgtgaagacagggc 264
Query: 65 ttctctgtgtagccctgcctgtcctggaactcactctgtaggtcaggctgacctcatatg 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctctgtgtagccctggctgtcctggaactcactctgtaggtcaggctgacctcatatg 324
Query: 125 catagagatctgcctggctgtgcctcccaagtgctgggattaaaggagtgggccaccact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catagagatctgcctggctgtgcctcccaagtgctgggattaaaggagtgggccaccact 384
Query: 185 actccaaattcactctaactcataagactgaattgcgacattcagggtccacgatgtata 244
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 385 actccaaattcactctaactcataagactgaattgcgacactcagggtccatgatgtata 444
Query: 245 ttttaaaaagataaatatttaaacctaactttttatgactttactggtgtggaggtgaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttaaaaagataaatatttaaacctaactttttatgactttactggtgtggaggtgaat 504
Query: 305 acaacaaccccagatttatta 325
|||||||||||||||||||||
Sbjct: 505 acaacaaccccagatttatta 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_o24.g1 MSMg01no267_o24.g1 CHROMAT_FILE:
MSMg01no267_o24.g1 PHD_FILE: MSMg01no267_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:07 2005
(291 letters)
>mm_chr1_177658779_177659469
Length = 691
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Minus
Query: 1 actatgtagcccaagctagcctcaagttcatgattcttctgcctctgcctttcagggact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 actatgtagcccaagctagcctcaagttcatgattcttctgcctctgcctttcagggact 516
Query: 61 ggaagtataggtgtgtgcctctaagctagagtagacattccttatttagctttggctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaagtataggtgtgtgcctctaagctagagtagacattccttatttagctttggctctc 456
Query: 121 aaaaatactgagggccttgcatctcatttcactgtaggtgcatctaactgaacaatgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaaaatactgagggccttgcatctcatttcactgtaggtgcatctaactgaacaatgtct 396
Query: 181 ataattattagagcaatggagtatttattcatgcaatgcccttaccttttaaagttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ataattattagagcaatggagtatttattcatgcaatgcccttaccttttaaagttcttc 336
Query: 241 gagtcaaggacctgagtttgtaatttctttttggtctttgcctgcttta 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gagtcaaggacctgagtttgtaatttctttttggtctttgcctgcttta 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
