Query= MSMg01no270_b06.b1 MSMg01no270_b06.b1 CHROMAT_FILE:
MSMg01no270_b06.b1 PHD_FILE: MSMg01no270_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:39 2005
(324 letters)
>mm_chr1_51395374_51396097
Length = 724
Score = 576 bits (298), Expect = e-169
Identities = 313/318 (98%)
Strand = Plus / Plus
Query: 5 gaattcactaggctactgcaaatctacctaggctttccctgccctggtttcacaggagtc 64
||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaataggcttctgcaaatctgcctaggctttccctgccctggtttcacaggagtc 264
Query: 65 agttcctctggaatcccaccactctacagtataaggtaaaagaaggggaagggactaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agttcctctggaatcccaccactctacagtataaggtaaaagaaggggaagggactaaga 324
Query: 125 gtatgactttcttacaaagactagaagtgaatgtgaaatggacatagccccatagacaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatgactttcttacaaagactagaagtgaatgtgaaatggacatagccccatagacaat 384
Query: 185 ctctggcagagtagttcatgggaagcctacacactgtgtgagtccattcatgctcctgcc 244
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 ctctggcagggtagttcatgggaagcctacacactgtgtgagtgcattcatgctcctgcc 444
Query: 245 tcagcacaccagacactgtgttgtttacaaaactcagaaacagtcatcatgtttctcaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagcacaccagacactgtgttgtttacaaaactcagaaacagtcatcatgtttctcaaa 504
Query: 305 gctgagagaagttcaagg 322
||||||||||||||||||
Sbjct: 505 gctgagagaagttcaagg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_b06.g1 MSMg01no270_b06.g1 CHROMAT_FILE:
MSMg01no270_b06.g1 PHD_FILE: MSMg01no270_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:39 2005
(641 letters)
>mm_chr1_51548383_51549423
Length = 1041
Score = 601 bits (311), Expect = e-176
Identities = 332/349 (95%), Gaps = 16/349 (4%)
Strand = Plus / Minus
Query: 309 aagttttaatagtatgcatagttttcatgcaggcttctgcccatattggtcaaatcccct 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 aagttttaatagtatgcatagttttcatgcaggcttctgcccatattggtcaaatcccct 982
Query: 369 ggaactgtagttaaaggaggttgtgagccacctgacgtgggtgctgggaacagaacttcc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 ggaactgtagttaaaggaggttgtgagccacctgacgtgggtgctgggaacagaacttcc 922
Query: 429 tcctgaagaagactgccatcttgatgattcctttttttttt----------------ttt 472
||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 921 tcctgaagaagactgccatcttgatgattcctttttttttttttttttttttttttgttt 862
Query: 473 tgagccatctctctagcccctagttgttttcttactctaagtttatcatcatgggtccct 532
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 861 tgagccatctctctagcccctagttgttttcttactctaagtttttcatcatgggtccct 802
Query: 533 gttcttatctaccaggaatagtgactgggcttttattgttcattcttggggccctccaca 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gttcttatctaccaggaatagtgactgggcttttattgttcattcttggggccctccaca 742
Query: 593 gtccatggctttgggtagttgtttggaacttattcagagtctattagct 641
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtccatggctttgggtagttgtttggaacttattcagagtctattagct 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
