Query= MSMg01no270_j13.b1 MSMg01no270_j13.b1 CHROMAT_FILE:
MSMg01no270_j13.b1 PHD_FILE: MSMg01no270_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:17 2005
(199 letters)
>mm_chr1_51127847_51128445
Length = 599
Score = 377 bits (195), Expect = e-109
Identities = 195/195 (100%)
Strand = Plus / Minus
Query: 5 gaattccctgtcacagttgctgcttccagatgggttcgcttgttatggactccacgaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gaattccctgtcacagttgctgcttccagatgggttcgcttgttatggactccacgaaaa 340
Query: 65 cggcacatttctctccttttttcctcagtttaaaagatacatcaacaacactgtggatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cggcacatttctctccttttttcctcagtttaaaagatacatcaacaacactgtggatgt 280
Query: 125 gtactcatgggaacaaagtgaatgcccctgtccttttatatgtggcacagccacaaacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtactcatgggaacaaagtgaatgcccctgtccttttatatgtggcacagccacaaacaa 220
Query: 185 gagtgcatatagtgg 199
|||||||||||||||
Sbjct: 219 gagtgcatatagtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no270_j13.g1 MSMg01no270_j13.g1 CHROMAT_FILE:
MSMg01no270_j13.g1 PHD_FILE: MSMg01no270_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:17 2005
(596 letters)
>mm_chr1_50994354_50995345
Length = 992
Score = 1029 bits (532), Expect = 0.0
Identities = 579/596 (97%), Gaps = 4/596 (0%)
Strand = Plus / Plus
Query: 1 aatagaaaaaataaaccaaggagtatctggatattttattttgctattatagttttgaaa 60
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagaaaaaataagccaaggagtaactggatattttattttgctattatagttttgaaa 260
Query: 61 tttcagccaaatatttctgctgccaacccagatagccatcagccttgtttttaataactt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tttcagccaaatatttctgctgccaacacagatagccatcagccttgtttttaataactt 320
Query: 121 gacatggctaaattgtttattttcaccctaagaagttagcaaggctacctcaggaaaaca 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gacatggctaaattgtttattttcaccctaaaaagttagcaaggctacctcaggaaaaca 380
Query: 181 attaaatagtagtggtaagtttgttgttacatcttttgtgtgctaatggattagtcactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 attaaatagtagtggtaagtttgttgttacatcttttgtgtgctaatggatcagtcactt 440
Query: 241 tcttaaaatcacctaattaatttagatacttgtgttgcctctgtctaaatcaaaggacca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttaaaatcacctcattaatttagatacttgtgttgcctctgtctaaatcaaaggacca 500
Query: 301 attggtccacttgacatcgacttttgtatctttgaatgacaggcacttacaaaccaacaa 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attggtccacttgacat-gacttttgtatctttgaatgacaggcacttacaaaccaacaa 559
Query: 361 cttgagatcactgaaaaccaaatgatgtggtttgttttggaaatagtgacttgtatttag 420
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 560 cttgagatcactgaaaaccaaaagatgtggtttgttttggaaatagttacttgtatttag 619
Query: 421 gatgtttgaggaatgcagaatccaataacaaccgtagttttttgtttgtgtgtgtctgtt 480
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 620 gatgtttgaggaatgcagaatccaataacaaccatagctttttgtttgtgtgtgtct--- 676
Query: 481 tttttttttcctctctttgttcttcagtgtaacagtgactacgtgcctgtgtgtggctct 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tttttttttcctctctttgttcttcagtgtaacagtgactacgtgcctgtgtgtggctcc 736
Query: 541 aatggagagagctaccagaatgaatgctatctgaggcaagctgcctgcaaacagca 596
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 737 aatggagagagctaccagaatgagtgctacctgaggcaagctgcctgcaaacagca 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 992
Length adjustment: 10
Effective length of query: 586
Effective length of database: 982
Effective search space: 575452
Effective search space used: 575452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
