XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
ATCCTCAGTTACCACATTGTGACTTAACAACCATCAGTAATGGGATCAGA
TGCCCTCTTCTGGTGTGTCTCAAGACAGCTAAAGCTGCAGTGTAGACATA
ATAAATAAAATAAATAAATCTTTAAAAAGAAAAGAAAAAAAAAAAGAAAA
TGTCTCATGGAAGCTGTACTATGTCACAATGTGTCTCACAGTATACCCCT
CTGTCCATACGTATTCATTAGCAAATGAGTTCATTGTAATTGAGTCATTG
GTCTGGTTCAAGATCTCTGTTTTCTGTGATGTCACCAAACATGATTCTTA
TTGAACCTCCTCTTTTTTATCCTACCCGCACCACTTTACATCTCAGTTCT
GCATATGAATGGGAACACAAGTTTCTCCAGATTCTTTCATTCCACATAAT
GATTTCCAGACCATTTTCGTCGTGATTTTATTTATTTTTGGTTGAATAAA
AGCCTACATTTTATTTATCTAATAATAATCTGGCAGTATAAAGGAGACCC
TGCAGGTGTCCAGGCAGGAAATCAAACCACAAAGAGATGAGAATAAAAAC
TTGGTTCAGATTGACTTTATCAACCTGGACCAGACTTGGGAGTTTGATGC
CAGGCAGTTGTCAGTGTATTTAAAACACAGCACAATTTGGGGAAAAGTTT
CCAGGAACAGTCACCCTCATTCTAGGTTTCCAGGAAACAATCATTCCAAT
TCCAGGTACACA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATGAGAAATCCTTTGGCACATTTCCCTCTA
CAAAGTGAAGACCAGGAAAACAGTGGAAGGCATAGCAATGCAAAAGCATC
CTTTAACATCTGTGGGGTTCTACTTATACTCTTTCCAAACATCAAGGGCC
CTCTCAAGTATTTGCTTCTGCAAAAACCCTCTTGGGTTCTGTTTCAGCAA
AACAGCGTCCAAAAAACAAACAAACAAACAAACCATCATGTGATCTCTCA
CAAGATAACTTCCAGAAAAACATCATGTGACCTCTCACAAGACAGCTTCC
AGGAAAAGTCACGTGACACAACAGAGTTTCCAAGGAAACCAGAAATTTCT
CCTTCATGAATGTCTAGCATAAACTGGAGGGTTTTCAGCCATCATGTTTG
TGCAGAGGATCTGCTTCTCAGTGTTGGATAGAGCAGAGAAACTAGTGAGA
GTCAATGGATCTGGACTCACTATGAGGGAATGCAGCACCGGCTATGCCTA
TGTCCTTCACCCAGGCTTAGACAGGGGAGCAAACAAAGAAGGAGAGCTCT
ATGCATGTCATTGTTACAACGTTCTGGTTCCACTCTTGTGAGATCTACAG
AGAAAGCAGGGCCCTTCTCTTTCTACATAGTGTGCACATTTGAAAATATA
CTTATCCCTAACCAAGAAAGAAACAGGANAATTTACTATTAAATCCATTA
GGAAAN

Query= MSMg01no271_k24.g1 MSMg01no271_k24.g1 CHROMAT_FILE:
MSMg01no271_k24.g1 PHD_FILE: MSMg01no271_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:37 2005
         (685 letters)



>mm_chr1_16075081_16076165
          Length = 1085

 Score = 1004 bits (519), Expect = 0.0
 Identities = 538/550 (97%), Gaps = 10/550 (1%)
 Strand = Plus / Minus

                                                                        
Query: 144  tgcttctgcaaaaaccctcttgggttctgtttcagcaaaacagcgtccaaa--------a 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||        |
Sbjct: 1085 tgcttctgcaaaaaccctcttgggttctgtttcagcaaaacagcgtccaaaaaacaaaca 1026

                                                                        
Query: 196  aacaaacaaacaaacaaaccatcatgtgatctctcacaagataacttccagaaaaacatc 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 aacaaacaaacaaacaaaccatcatgtgatctctcacaagataacttccagaaaaacatc 966

                                                                        
Query: 256  atgtgacctctcacaagacagcttccaggaaaagtcacgtgacacaacagagtttccaag 315
            ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 965  atgtgacctctcacaagacagcttccaggaaaagtcacgtgacacaac--agtttccaag 908

                                                                        
Query: 316  gaaaccagaaatttctccttcatgaatgtctagcataaactggagggttttcagccatca 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907  gaaaccagaaatttctccttcatgaatgtctagcataaactggagggttttcagccatca 848

                                                                        
Query: 376  tgtttgtgcagaggatctgcttctcagtgttggatagagcagagaaactagtgagagtca 435
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 847  tgtttgtgcagaggatctgcttctcagtgttggatagagcagagaaaccagtgagagtca 788

                                                                        
Query: 436  atggatctggactcactatgagggaatgcagcaccggctatgcctatgtccttcacccag 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787  atggatctggactcactatgagggaatgcagcaccggctatgcctatgtccttcacccag 728

                                                                        
Query: 496  gcttagacaggggagcaaacaaagaaggagagctctatgcatgtcattgttacaacgttc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727  gcttagacaggggagcaaacaaagaaggagagctctatgcatgtcattgttacaacgttc 668

                                                                        
Query: 556  tggttccactcttgtgagatctacagagaaagcagggcccttctctttctacatagtgtg 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667  tggttccactcttgtgagatctacagagaaagcagggcccttctctttctacatagtgtg 608

                                                                        
Query: 616  cacatttgaaaatatacttatccctaaccaagaaagaaacagganaatttactattaaat 675
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 607  cacatttgaaaatatacttatccctaaccaagaaagaaacaggaaaatttactattaaat 548

                      
Query: 676  ccattaggaa 685
            ||||||||||
Sbjct: 547  ccattaggaa 538


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)