Query= MSMg01no272_e23.b1 MSMg01no272_e23.b1 CHROMAT_FILE:
MSMg01no272_e23.b1 PHD_FILE: MSMg01no272_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:26 2005
(381 letters)
>mm_chr1_61756997_61757776
Length = 780
Score = 698 bits (361), Expect = 0.0
Identities = 376/381 (98%), Gaps = 1/381 (0%)
Strand = Plus / Plus
Query: 1 ctcttcttttgaaaaagtacaaaaatgccttgagactatctcacatatgtcactattatc 60
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 201 ctcttcttttgaaaaagtacaaaaatgcc-tgagactatctcaaatatgtcactattatc 259
Query: 61 aacagttatatttatagtatccttcacagagtgagtggtatgacaagacacaagcaagga 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aacagttgtatttatagtatccttcacagagtgagtggtatgacaagacacaagcaagga 319
Query: 121 gcactttatgtcatgactcatcgctagagaggaatataccaaaattctcaaatgtggttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 gcactttatgtcatgactcatcgctagagaggaatataccaaaattctcaaatgtgattg 379
Query: 181 cattggtttattttcacgtgaaatacaaactaccaagtgtaacttctgggcattcattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 cattggtttattttcacgtgaaatacaaactaccaagtgtaacttctggccattcattgt 439
Query: 241 taaggttgtttgaacaaaacttattgccacatcagtcatgtcctacaaaagcaatatgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaggttgtttgaacaaaacttattgccacatcagtcatgtcctacaaaagcaatatgcc 499
Query: 301 tttcccttaaaatttatctacctttaaagtccttaagttgatgataaaagaaataaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttcccttaaaatttatctacctttaaagtccttaagttgatgataaaagaaataaaact 559
Query: 361 caatcacacttgatatactta 381
|||||||||||||||||||||
Sbjct: 560 caatcacacttgatatactta 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 780
Length adjustment: 9
Effective length of query: 372
Effective length of database: 771
Effective search space: 286812
Effective search space used: 286812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_e23.g1 MSMg01no272_e23.g1 CHROMAT_FILE:
MSMg01no272_e23.g1 PHD_FILE: MSMg01no272_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:26 2005
(294 letters)
>mm_chr1_61873501_61874194
Length = 694
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Minus
Query: 1 agtatactttttagacagaaggatatttgtaacaagtagacacttgggaatggtgggtat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 493 agtatactttttagacagaaggatatttgtaacaagtagacacctgggaatggtgggtat 434
Query: 61 atttcacatttacatatagttccacttaaaacccatcatatgaaaaaggacctaaccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atttcacatttacatatagttccacttaaaacccatcatatgaaaaaggacctaaccatt 374
Query: 121 tattttgacatcaatatacgtatttctacactctgctgcagtctttggactaatttttaa 180
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tatttcgacatcaatatacatatttctacactctgctgcagtctttggactaatttttaa 314
Query: 181 acattctagtttcatccagcttaagacattgagattcacaatgaacctagcaggcctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acattctagtttcatccagcttaagacattgagattcacaatgaacctagcaggcctctt 254
Query: 241 tggagaacatgtataagggaacctgctgctccagaagcggtacctgcatgctg 293
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 253 tggagaacatgtataagggaacctgctgctccagaagcagtacctgcatgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
