Query= MSMg01no273_f04.b1 MSMg01no273_f04.b1 CHROMAT_FILE:
MSMg01no273_f04.b1 PHD_FILE: MSMg01no273_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:40 2005
(322 letters)
>mm_chr1_22783355_22784077
Length = 723
Score = 576 bits (298), Expect = e-169
Identities = 313/318 (98%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagtgccaatcctagaccttccttttgattttgaggcaggaaaatagtgagtta 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggaattcagtgccaagcctagaccttccttttgattttgaggcaggaaaatagtgagtta 462
Query: 64 agaattaataatgtagccacatatttgagaaaaacaataacatggtcaaacatgggctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agaattaataatgtagccacatatttgagaaaaacaataacatggtcaaacatgggctgt 402
Query: 124 atgaagataaagtgcagccaagtatccagtgggagagggtcgggaaggaacacggaggac 183
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 401 atgaagataaaatgcagccaagtatccagtgggagagggtcggggaggaacacggaggac 342
Query: 184 agacaggtatagcacaggctgggtgtgtgttgtcgttgttacacagtgggtattctttca 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 341 agacaggtatagcacaggctgggtgtgtgttgtagttgttacacagtgggtattctttca 282
Query: 244 taacttgtaaacaccagtgtggttgctggtgatagtgccaaccca-ttgagaagaggtgg 302
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 281 taacttgtaaacaccagtgtggttgctggtgatagtgccaacccatttgagaagaggtgg 222
Query: 303 gtgggtatgaattaatga 320
||||||||||||||||||
Sbjct: 221 gtgggtatgaattaatga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_f04.g1 MSMg01no273_f04.g1 CHROMAT_FILE:
MSMg01no273_f04.g1 PHD_FILE: MSMg01no273_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:40 2005
(293 letters)
>mm_chr1_22623674_22624366
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Plus
Query: 1 tttgtacacatgatattcatccaaatagttggaaattcttctctgctgtatctcctccaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtccacatgatattcatccaaatagttggaaattcttctctgctgtatctcctccaa 260
Query: 61 ttcttctttgccttcaggctaagtcatttgtcatttggcttgatttcatatccctttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttctttgccttcaggctaagtcatttgtcatttggcttgatttcatatccctttgct 320
Query: 121 atcctgatagtcactaaaaatgcttcagatatctattccattacgaaagtaggacaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcctgatagtcactaaaaatgcttcagatatctattccattacgaaagtaggacaccct 380
Query: 181 gaactggaataaattattaaggtgcattcctagtattctgcatttatagactctgtttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaactggaataaattattaaggtgcattcctagtattctgcatttatagactctgtttct 440
Query: 241 gtttataactctaattcagaatacttttggtaagtcataatcatgcaattgat 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttataactctaattcagaatacttttggtaagtcataatcatgcaattgat 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
