Query= MSMg01no273_p18.b1 MSMg01no273_p18.b1 CHROMAT_FILE:
MSMg01no273_p18.b1 PHD_FILE: MSMg01no273_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:27 2005
(339 letters)
>mm_chr1_104082493_104083231
Length = 739
Score = 609 bits (315), Expect = e-179
Identities = 333/339 (98%)
Strand = Plus / Minus
Query: 1 atcctatgggtgtatgtgtttgtaaaacagaacaagatgcagtcttatcaacatccccag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 539 atcctatgggtgtatgtgtttgtaaaacagaacaagatgcagtcttttcaacatccccag 480
Query: 61 gataagtcacaaacgacaaagcctaacttgtcagatgcatcctaattggctggagggtct 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gataagtcacaaaagacaaagcctaacttgtcagatgcatcctaattggctggagggtct 420
Query: 121 gagttttatggcttcatttcttctgggcatgaagacgcaggcatcacaatgcaggagtta 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 419 gagttttatggcttcatttcttctgggcatgaagacgcaggcatcacagtgcaggagtta 360
Query: 181 aaggaaaaagcagagaacatcagtcaaaggtgacaggactaacgcccgtgaagagaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 359 aaggaaaaagcagagaacatcagtcaaaggtgacaggactaacgcccatgaagagaaagt 300
Query: 241 ttcagtaagaggtctctcttgctaaggtttctaagggacaacaacttgtcctacatgagt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttcagtaagagctctctcttgctaaggtttctaagggacaacaacttgtcctacatgagt 240
Query: 301 cataggcctggaaagatcatgacaaatgcactgaagaaa 339
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 239 cataggcctggaaagatcgtgacaaatgcactgaagaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_p18.g1 MSMg01no273_p18.g1 CHROMAT_FILE:
MSMg01no273_p18.g1 PHD_FILE: MSMg01no273_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:27 2005
(289 letters)
>mm_chr1_104028890_104029579
Length = 690
Score = 451 bits (233), Expect = e-131
Identities = 275/289 (95%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 tcagaagcagtaggcctgtgatgcataaa-ctaggttaaccatcatgaagctataggagt 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tcagaagcagtaggcctgtgatgcataaaactaggttaaccatcatgaagctataggagt 260
Query: 60 tatatactcatttagagttttagagttgtcagtcctattaacaataagccttggggcata 119
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tatatactcatttcgagctttagagttgtcagtcctattaacaataagccttggggcaca 320
Query: 120 taactgacctgagaagttgttctacacactgacgttagactcagctttatcaatatctaa 179
||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 321 taactgacccgagaagttgtactacgcactgacgttagactcagagttatcaatatctaa 380
Query: 180 ggctgtgagttcagctcctatgaactgagggtgaggtcaccagccatcctatcaagctaa 239
|||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctatgaggtcagcgcctatgaactgagggtgaggtcaccagccatcctatcaagctaa 440
Query: 240 atctcttgccttccaaactagtttgtgctacgcttgctgctagggttta 288
||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 441 atctcttgccttccaaactagtttgtgctacacttgttgctagggttta 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
