Query= MSMg01no274_a11.b1 MSMg01no274_a11.b1 CHROMAT_FILE:
MSMg01no274_a11.b1 PHD_FILE: MSMg01no274_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:30 2005
(614 letters)
>mm_chr1_43241011_43242024
Length = 1014
Score = 1125 bits (582), Expect = 0.0
Identities = 606/614 (98%)
Strand = Plus / Plus
Query: 1 atttggaatacattgggctgaattcacggaattgatatgctaatactatgattcctgata 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttggaatacattgggctgcattcacggaattgatatgctaatactatgattcctgata 260
Query: 61 tgctaggaaactgtagaaattcaaacgttttatgaaaactcaagtaaagaaggagtgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctaggaaactgtagaaattcaaacgttttatgaaaactcaagtaaagaaggagtgctt 320
Query: 121 atgaatctttggagaggacagcagagataaacgcactctaactcagggcaatgtcataaa 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 atgaatctttggagaggacagcagagataaatgcactctaactcagggcaatgtcataaa 380
Query: 181 atagccagtgaatatggccagatctccaatattaatagccattgcactttggagatagtg 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagccagtgaatagggccagatctccaatattaatagccattgcactttggagatagtg 440
Query: 241 tagtgagagccagcatgcaagcaactgaacttcagcacttctgatcttctacacgcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 tagtgagagccagcatgcaagcaactgaacttcagcacttctgatcttctacaggcaagg 500
Query: 301 aattcaaatatttgaggctgcaggcaagctcacagaggccacgtgtttacagtataggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 aattcaaatatttgaggctgcaggcaagctcacagaggccacgtgtttacagtgtaggca 560
Query: 361 gcgttgcttggggcccttagggctgctgttctgagaattctagccattgtattttggctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcgttgcttggggcccttagggctgctgttctgagaattctagccattgtattttggctc 620
Query: 421 tgccttaaacgagggtaacaaagacttccccaagcaaacttttgggcctgacatacaaac 480
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 tgccttaaacgatggtaacaaagactttcccaagcaaacttttgggcctgacatacaaac 680
Query: 481 atgcatcccttaagtgatgaagtcacattcccagaactataaagtttggcaatttcatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgcatcccttaagtgatgaagtcacattcccagaactataaagtttggcaatttcatta 740
Query: 541 tccggcagttttgtcactgagtgaacgtcaaagcatgtacttcttcaaccttagatgatg 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tccggcagttttgtcaccgagtgaacgtcaaagcatgtacttcttcaaccttagatgatg 800
Query: 601 tggcctcccacgtg 614
||||||||||||||
Sbjct: 801 tggcctcccacgtg 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_a11.g1 MSMg01no274_a11.g1 CHROMAT_FILE:
MSMg01no274_a11.g1 PHD_FILE: MSMg01no274_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:30 2005
(284 letters)
>mm_chr1_43396859_43397542
Length = 684
Score = 460 bits (238), Expect = e-134
Identities = 266/280 (95%), Gaps = 8/280 (2%)
Strand = Plus / Minus
Query: 1 tagaattaggggactttggccagtttaaaaataaatgctcatcccctctttcctttcttg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 449 tagaattaggggactttggccagtttaaaaataaatgctcatcccttctttcctttcttg 390
Query: 61 cttctgtgaggggaagtttcccagcaagcaaagccatacagacaagttagcaatgtgcca 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 389 cttctgtgaggggaagtttcccagcaagcaaagccacacagacaagttagcaatgtgccc 330
Query: 121 cattctgagacccagctattaaagtctcatttagagttgtagtcccacaggaccccagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cattctgagacccagctattaaagtctcatttagagttgtagtcccacaggaccccagct 270
Query: 181 cttgagtttaatgcctgaaatcatgtgtacaaatgccaaagtatatccgaatgatgtctg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 269 cttgagtttaatgcctgaaatcatttgtacaaatgccaaagtatatccgaatgatgtttg 210
Query: 241 aatgctctttagatcttgcctttatcagaatttgagatca 280
|| |||||| |||||||||||||||||||||||
Sbjct: 209 aaggctctt--------gcctttatcagaatttgagatca 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|