Query= MSMg01no274_c18.b1 MSMg01no274_c18.b1 CHROMAT_FILE:
MSMg01no274_c18.b1 PHD_FILE: MSMg01no274_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:40 2005
(230 letters)
>mm_chr1_137935088_137935717
Length = 630
Score = 395 bits (204), Expect = e-114
Identities = 222/230 (96%), Gaps = 4/230 (1%)
Strand = Plus / Minus
Query: 1 agtctctggtaactgtgacaggaggtcacattgaacagttgttgtagtgatgtgaacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agtctctggtaactgtgacaggaggtcacattgaacagttgttgtagtgatgtgaacagg 331
Query: 61 agccacccacattcactgtgtgcccacgtggaagggtcagactaagggtctttgcatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agccacccacattcactgtgtgcccacgtggaagggtcagactaagggtctttgcatcaa 271
Query: 121 catccctgtccttacagctaggtcagaggtggttgctgctcccactgcagttaagaaagt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 270 catccctgtccttacagctaggacagaggtggttgctgctcccactgcagttaagaaagt 211
Query: 181 gaggcaggtatattttgtttgtttgtttgtttgtttaaggtatttgttct 230
|||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 210 gaggcaggtaga----gggtgtttgtttgtttgtttaaggtatttgttct 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_c18.g1 MSMg01no274_c18.g1 CHROMAT_FILE:
MSMg01no274_c18.g1 PHD_FILE: MSMg01no274_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:40 2005
(286 letters)
>mm_chr1_137781703_137782388
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Plus
Query: 1 agagcctagctccttcctatcctacttagggacctaagcaagtttctcccctgtctggag 60
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 201 agagcctagctccttcctatcctacttagggacctaagcaagtctctcctctgtctggag 260
Query: 61 ccatattttcctctcatcttttcctctcctggggcagagtgaaggccagagagaagatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatattttcctctcatcttttcctctcctggggcagagtgaaggccagagagaagatgc 320
Query: 121 acttccatgttcttcagaatcctaaggtgaggcgcacacacaaggtgccacagaaacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttccatgttcttcagaatcctaaggtgaggcgcacacacaaggtgccacagaaacttt 380
Query: 181 cttgtggtagaaatgttgatgaaaaccaccccaggcttctaggaagccacttgtggcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgtggtagaaatgttgatgaaaaccaccccaggcttctaggaagccacttgtggcaca 440
Query: 241 catagctgtgctatgtcttgtaggtgttttcctagctgggca 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catagctgtgctatgtcttgtaggtgttttcctagctgggca 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
