Query= MSMg01no275_d02.b1 MSMg01no275_d02.b1 CHROMAT_FILE:
MSMg01no275_d02.b1 PHD_FILE: MSMg01no275_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:53 2005
(234 letters)
>mm_chr1_58444454_58445087
Length = 634
Score = 398 bits (206), Expect = e-115
Identities = 227/234 (97%)
Strand = Plus / Minus
Query: 1 ctggctgtcctggaactctgtagaccaggctggccttgaactcacagaggtccacctgcc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 538 ctggctgtcctggaactctgtagaccaggctggcctcgaactcacagaggtccacctgcc 479
Query: 61 tctgtctcctgagtgctgagattaaaggtgtggccaccattacctcataattccctcttt 120
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 478 tctgcctcctgagtgctgagattaaaggtgtggccaccactacctcataattccctcttt 419
Query: 121 aatatacatagttgctcacatatgggctacaatatgataattcagcatatacattcaata 180
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 418 aatatacatagttgctcatatatgggctacagtatgataattcagcatatacattcaata 359
Query: 181 caacttaacacgaaatttccatgaagaacttagagtactctgttccatgaggaa 234
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 358 caacttaacatgaaatttccatgaagaatttagagtactctgttccatgaggaa 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no275_d02.g1 MSMg01no275_d02.g1 CHROMAT_FILE:
MSMg01no275_d02.g1 PHD_FILE: MSMg01no275_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:53 2005
(281 letters)
>mm_chr1_58270156_58270836
Length = 681
Score = 449 bits (232), Expect = e-130
Identities = 266/278 (95%), Gaps = 2/278 (0%)
Strand = Plus / Plus
Query: 1 caggacagccagaactatacagagaaaccctgtctcaaagaaaatcaccaccaagaaaaa 60
|||||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 203 caggacagccagaactatacagagaaaccctgtctcaaagaaaaccaaaaacaagaaaaa 262
Query: 61 agaaaaagaaaaaaaaaagaatgaaaggaaagccacctgcgttccctctaggtaagcaac 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agaaaa--aaaaaaaaaagaatgaaaggaaagccacctgcgttccctctaggtaagcaac 320
Query: 121 tctgtctccattcatggagactagttggagttcagacacagatgtgtggattcatgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tctgtctccattcatggagactagttggagttcagacacagatgtgtggattcatatttt 380
Query: 181 atctactgcatttttacccgagcaaaacaaaacaagaaaaccaacaacaacaaaaacaaa 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctactgcatttttacccaagcaaaacaaaacaagaaaaccaacaacaacaaaaacaaa 440
Query: 241 aaacaatgtttacaccccagcaccagactgggagtgct 278
|||||| | |||||||||||||||||||||||||||
Sbjct: 441 aaacaacgcacacaccccagcaccagactgggagtgct 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
