NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGATTCCTACGTGCCCCATGCCCTGAAGAAACCATGCATTCCGCATAGAA
ATCAAATTCAATGAACAACAACTTTTTATTTTATTTTGAAAAATAGATTT
ATTTCCTTAATGGATTTTTTTTCCCTTTTTCCCTTAAAACCCCCCCCCCC
CCCAAAAACCCCCCACCCTCCCTCCCCCCCCCCCCCCCCACCAAACACAT
ACCCCTCCCCCCCCCTTTTCTCTCCTTTCTCTCCCTCTTCCTTCCCTCTC
CCTCTTCTTTCTCCCTCCTCTCTTTCCCCTCTCTTCTTCTCTCTTTTTTT
CTCCCTTTTCCTCTCCCCCCCCCCCCTCGGGGGGGAGGGGTTGATCCTTT
TTTCCCCCCCCCCCCCCCTAAAACCCCCAAAAAAAAAAGAACCCCCCCTC
CCCCCCCCCCTTCGGTGGTGTAATACACCCTCTCCTCCCTCCCTTCTGTG
TGGGTGGGGTGGTGTTTTTTCCCACACCACCCCCCCCCCTCTCCTGCTGT
ATAGGGGCCGGCGGGGGGGGAGAAGAACCCTCCCCCCCCCCCCTTCTTTT
TTTTGTGTGCCCCCCCCCCCCCCCCCCCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTAATGTGAAGATATAAATATGT
TTCCCACATCTTAACTTGAAAAACCACGATATTGTATTTCCGGTTGCTTG
CATTAGCATTCTTTTCTTAAAGGGCATTTCAAAAGTAGTTTTATTTATTT
ATTTATTTATTTATTTATTTATTTATTTATTTATTTGCAAAATTGAAATG
GACCTACATTTATCTGTGCCTCTAAACCAATATCCTCTCTTGCCATCAGT
ATCAGCACATCTACAGCTGTTGAACCTCTTGGTTTCTACAAATGTAGGGC
AACCTACATTTTCCAGTGAATGTTTAGGTTTGTTTGTTTGTCTTGTTTTC
ATGTTGGACATCTGGGCAGTATCAGTCTTCTCAATTTAAAATAGTCTATG
AAAATAAAGAATATTTGCTACTTCAACTATTTTATTTAAAAATGTAAGAT
TTTTTTTGTCCATGTTTTTCCTTTGGACAGGAACATTTCTGGGTTTAAAT
TTTTGAGATGCGTATTGTTGATGCCATGAATCGCTTGCTGAGAAAACCTT
GATATGGCTGTTCCTTGAGAAGTTCTATCAGCATCTGACAAATACGAATG
CAGATAATCACACCCAATCATCGTAATGGGCATAGGGACCTGGATGGAAG
AGCTAGGAGAAGCACTGAAGGAGATGAAGGGATTACAACCCCAGAAGAA

Query= MSMg01no275_l13.g1 MSMg01no275_l13.g1 CHROMAT_FILE:
MSMg01no275_l13.g1 PHD_FILE: MSMg01no275_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:30 2005
         (670 letters)



>mm_chr1_149721332_149722400
          Length = 1069

 Score = 1102 bits (570), Expect = 0.0
 Identities = 635/672 (94%), Gaps = 28/672 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtaatgtgaagatataaatatgtttcccacatcttaacttgaaaaaccacgatattgta 60
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 201 agtaatgtgaagatataaatatgtttcccacatcttaacttgaaaaag-acgatattgta 259

                                                                       
Query: 61  tttccggttgcttgcattagcattcttttcttaaagggcatttcaaaagtagttttattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttccggttgcttgcattagcattcttttcttaaagggcatttcaaaagtagttttattt 319

                                                                       
Query: 121 atttatttatttatttatttatttatttatttatttatttgcaaaattgaaatggaccta 180
           ||||||||||||||||                        |||||||||||| |||||||
Sbjct: 320 atttatttatttattt------------------------gcaaaattgaaaaggaccta 355

                                                                       
Query: 181 catttatctgtgcctctaaaccaatatcctctcttgccatcagtatcagcacatctacag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 catttatctgtgcctctaaaccaatatcctctcttgccatcagtatcagcacatctacag 415

                                                                       
Query: 241 ctgttgaacctcttggtttctacaaatgtagggcaacctacattttccagtgaatgttta 300
           |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 416 ctgttgaaactcttggtttctacaaatgtaggacaacctacattttccagtgaatgttta 475

                                                                       
Query: 301 ggtttgtttgtttgtcttgttttcatgttggacatctgggcagtatcagtcttctcaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggtttgtttgtttgtcttgttttcatgttggacatctgggcagtatcagtcttctcaatt 535

                                                                       
Query: 361 taaaatagtctatgaaaataaagaatatttgctacttcaactattttatttaaaaatgta 420
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tataatagtctatgaaaataaagaatatttgctacttcaactattttatttaaaaatgta 595

                                                                       
Query: 421 agattttttttgtccatgtttttcctttggacaggaacatttctgggtttaaatttttga 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 596 agattttttttgtccatgtttttcctttggacaggatcatttctgggtttaaatttttga 655

                                                                       
Query: 481 gatgcgtattgttgatgccatgaatcgcttgctgagaaaaccttgatatggctgttcctt 540
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gatgtgtattgttgatgccatgaatcgcttgctgagaaaaccttgatatggctgttcctt 715

                                                                       
Query: 541 gagaagttctatcagcatctgacaaatac-gaatgcagataatcacacccaatcatcgta 599
           ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 716 gagaagttctatctgcatctgacaaatacaga-tgcagataatcacacccaatcatcgta 774

                                                                       
Query: 600 atgggcatagggacctggatggaagagctaggagaagcactgaaggagatgaaggg-att 658
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 775 atgggcatagggacctggatggaagagctaggagaagcactgaaggagatgaaggggatt 834

                       
Query: 659 acaaccccagaa 670
           | ||||||||||
Sbjct: 835 ataaccccagaa 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1069
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1059
Effective search space:   698940
Effective search space used:   698940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)