Query= MSMg01no275_n20.b1 MSMg01no275_n20.b1 CHROMAT_FILE:
MSMg01no275_n20.b1 PHD_FILE: MSMg01no275_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:41 2005
(314 letters)
>mm_chr1_176845131_176845845
Length = 715
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 5 gaattcctctcaac-aacaatatgaacgtcgttgagttcgatttgtccctaatctttgga 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattcctctcaacaaacaatatgaacgtcgttgagttcgatttgtccctaatctttgga 456
Query: 64 ggaggcaaactagaaatgttgcttggttcagaaagtaaaatcatattagtactttgttga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggaggcaaactagaaatgttgcttggttcagaaagtaaaatcatattagtactttgttga 396
Query: 124 tctagaagaagattatctatgcattgtgaaagatatttaaacctggaaagtcaggcaact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tctagaagaagattatctatgcattgtgaaagatatttaaacctggaaagtcaggcaact 336
Query: 184 tggttttcatgttcacatctttccctgggaaaactaccacttcccccatgttcgttcttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tggttttcatgttcacatctttccctgggaaaactaccacttcccccatgttcgttcttt 276
Query: 244 gtactaaataaacaagagtgtatcattgtgcttcatactagtcttagacttcagctctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtactaaataaacaagagtgtatcattgtgcttcatactagtcttagacttcagctctgt 216
Query: 304 tcttctttctg 314
|||||||||||
Sbjct: 215 tcttctttctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_n20.g1 MSMg01no275_n20.g1 CHROMAT_FILE:
MSMg01no275_n20.g1 PHD_FILE: MSMg01no275_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:41 2005
(278 letters)
>mm_chr1_176710045_176710722
Length = 678
Score = 538 bits (278), Expect = e-157
Identities = 278/278 (100%)
Strand = Plus / Plus
Query: 1 ttaccattctttccagaaggtagtatctggtctgccattttgttgttatggaacccaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaccattctttccagaaggtagtatctggtctgccattttgttgttatggaacccaatt 260
Query: 61 cctgcaaatttctcatgaactaatatcccttgaagttttctgtacttgaaacagttttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgcaaatttctcatgaactaatatcccttgaagttttctgtacttgaaacagttttca 320
Query: 121 tgtgctcttttacttgtgtgggtattaaatgcttggccttcttcctctgtttgctgcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgctcttttacttgtgtgggtattaaatgcttggccttcttcctctgtttgctgcctt 380
Query: 181 aaataatgtgtttcattgaccacatccttttaagtcatatttttatatttatttgttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaataatgtgtttcattgaccacatccttttaagtcatatttttatatttatttgttacc 440
Query: 241 attttgtgtatgtgtgcactcatacatgcgtgcaggat 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attttgtgtatgtgtgcactcatacatgcgtgcaggat 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|