Query= MSMg01no277_j10.b1 MSMg01no277_j10.b1 CHROMAT_FILE:
MSMg01no277_j10.b1 PHD_FILE: MSMg01no277_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:45 2005
(230 letters)
>mm_chr1_6401924_6402553
Length = 630
Score = 410 bits (212), Expect = e-119
Identities = 224/232 (96%), Gaps = 8/232 (3%)
Strand = Plus / Plus
Query: 1 ttgattcaataaactctttgagtacaggcaccatatcttttgcctattaatctatgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgattcaataaactctttgagtacaggcaccatatcttttgcctattaatctatgggtg 260
Query: 61 tccatgctagtggctcatattcagtatctcccagcaattttctatgtatactgtctatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccatgctagtggctcatattcagtatctcccagcaattttctatgtatactgtctatgg 320
Query: 121 acctggtcttcatttacaaaggatgaaatttagatcataaaggtccttacaatatctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctggtcttcatttacaaaggatgaaatttagatcataaaggtccttacaatatctaca 380
Query: 181 gtattaatgactttta----tgctagtgagttcaatagactcactcaaagta 228
||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 381 gtattaatgac----aggcatgctagtgagttcaatagactcactcaaagta 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_j10.g1 MSMg01no277_j10.g1 CHROMAT_FILE:
MSMg01no277_j10.g1 PHD_FILE: MSMg01no277_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:45 2005
(229 letters)
>mm_chr1_6579981_6580609
Length = 629
Score = 435 bits (225), Expect = e-127
Identities = 228/229 (99%)
Strand = Plus / Minus
Query: 1 ttgcaaatacaaaatgcaatctagtcacagtacttcaattcatataatcaatcttagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttgcaaatacaaaatgcaatctagtcacagtacttcaattcatataatcaatcttagaat 313
Query: 61 ttatgcaacacttaaacatttatagcattttaaaaattattcctaagtctctgggtaaaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 312 ttatgcaacacttaaacatttatatcattttaaaaattattcctaagtctctgggtaaaa 253
Query: 121 ttttactacaaataagacttggttgtgctgagactaatcttggtaagactattgtattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttactacaaataagacttggttgtgctgagactaatcttggtaagactattgtattcc 193
Query: 181 ttagggtttctactgctgtgatgaaacactatgaccaaaagcaacttgg 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttagggtttctactgctgtgatgaaacactatgaccaaaagcaacttgg 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
