Query= MSMg01no278_f02.b1 MSMg01no278_f02.b1 CHROMAT_FILE:
MSMg01no278_f02.b1 PHD_FILE: MSMg01no278_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:37 2005
(315 letters)
>mm_chr1_75996205_75996919
Length = 715
Score = 569 bits (294), Expect = e-166
Identities = 306/312 (98%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 4 ggaattccaccttagttcaacttaaattttcttccatcagtggcaaataatgcctactgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaattccaccttagttcaacttaaattttcttccatcagtggcaaataatgcctactgg 267
Query: 64 atagccaggaaatttccaaactggtgctttttgtttgtttgtttgtttgttttaacatct 123
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 268 atagccaggaaatttccaaactggtgctttttgtttgtttgtttgttt----taacatct 323
Query: 124 ttacacaacccagagaggttcaggagctgcacaatcgtgagttattatgacttgttaatg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 ttacacaacccagagaggttcaggagctgcacaatcgtgagttattatgacttgtttatg 383
Query: 184 gtagttgtttgttggactggtgtggtatggatttgtgggacagggcatagggcatgcatt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 gtagttgtttgttggactggtgtggtatggatttgtgggacagggcatagggcacgcatt 443
Query: 244 tcaactgttcactcttgccctactctggagccaggctttcacataataggaaacacatta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaactgttcactcttgccctactctggagccaggctttcacataataggaaacacatta 503
Query: 304 gtctgattctgt 315
||||||||||||
Sbjct: 504 gtctgattctgt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_f02.g1 MSMg01no278_f02.g1 CHROMAT_FILE:
MSMg01no278_f02.g1 PHD_FILE: MSMg01no278_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:37 2005
(297 letters)
>mm_chr1_76118470_76119166
Length = 697
Score = 567 bits (293), Expect = e-166
Identities = 296/297 (99%)
Strand = Plus / Minus
Query: 1 tttaagcccatggaatgctttaaaacctgaaaaccagaggacaataaaatgactacggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tttaagcccatggaatgctttaaaacctgaaaaccagaggacaataaaatgactacggaa 438
Query: 61 aggtataaaaataatggccagcaactgacatcagcccctgctctaattgtaaagaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aggtataaaaataatggccagcaactgacatcagcccctgctctaattgtaaagaagcag 378
Query: 121 tgtatgcctgctcctgagaaaagcacacttgtctctcagcactaggtcactgtcacatcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 377 tgtatgcctgctcctgagaaaagcacacttgtctctcagcactaggtcaccgtcacatcc 318
Query: 181 taagtgaaggagtctaacatggccagtcactgacaaatgcagagaccaaggtacttactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 taagtgaaggagtctaacatggccagtcactgacaaatgcagagaccaaggtacttactc 258
Query: 241 aagaatttcaggttccaaattcccactgaggactgacaatgtaaagaatttacctcg 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aagaatttcaggttccaaattcccactgaggactgacaatgtaaagaatttacctcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
