Query= MSMg01no279_e02.b1 MSMg01no279_e02.b1 CHROMAT_FILE:
MSMg01no279_e02.b1 PHD_FILE: MSMg01no279_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:48 2005
(640 letters)
>mm_chr1_166898973_166900014
Length = 1042
Score = 1160 bits (600), Expect = 0.0
Identities = 632/652 (96%), Gaps = 16/652 (2%)
Strand = Plus / Plus
Query: 5 gaattcctttgtccagtttttgcctgtgttgtaattttatcagctttcctttcctatcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaattcctttgtccagtttttgcctgtgttgtaattttatcagctttcctttcctatcta 250
Query: 65 tacaatgactgaaactcagatatacattacatcctttcagcaacctaacttcaaaagcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tacaatgactgaaactcagatatacattacatcctttcagcaacctaacttcaaaagcta 310
Query: 125 caaaatcatatatatatatatatacatatata--------------tatatatacacaca 170
|||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 311 caaaatcatatatatatatatatatatatatatatatatatatatgtatatatacacaca 370
Query: 171 tatatatacattcatatatacttttaattcctttagacaggctctcattatgcagtttag 230
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 371 tatatatacattcatatatacttttaattcttttagacaggctctcattatgcagtttag 430
Query: 231 gcaggcctcagatttgtggcaatcctctttacagatgtgtgtcatatgagtttgtctaaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 gcaggcctcagatttgtggcaatcctctttacagatgtgtgtcatatgagtttgtttaaa 490
Query: 291 ctaccttctcaaacatttctgtagtatgtgacaccactccatatatatataatgttttaa 350
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 491 ctaccttctcaaacatttctgtagtaggtgacaccactccatatatatataatgttttaa 550
Query: 351 ctagtctacctctcttgagaagctacatctgccctttgagtgtgcactaactgtccttta 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctagtctacctctcttgagaagctacatctgccctttgagtgtgcactaactgtccttta 610
Query: 411 cataataaatcaaaattttgcttcacaccaactcaccttgaagttattttctgcagcata 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cataataaatcaaaattttgcttcacaccaactcaccttgaagttattttctgcagcata 670
Query: 471 aatccaggtccaggctattcctgagtacaggtccctgggaggaacgcctcagtctgtaag 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aatccaggtccaggctattcctgagtacaggtccctgggaggaacgcctcagtctgtaag 730
Query: 531 ctggcaattttttcttctgctgtaggtgactcacatagtgtgatataaataaatgtccct 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ctggcaattttttcttctgctgtaggtgactcacatagtgtgatataaataaatgtccct 790
Query: 591 ccatgtagggacatattgatttttttttt--ggtcatctttctttatcaggg 640
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 791 ccatgtagggacatattgattttttttttttggtcatctttctttatcaggg 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1042
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1032
Effective search space: 650160
Effective search space used: 650160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_e02.g1 MSMg01no279_e02.g1 CHROMAT_FILE:
MSMg01no279_e02.g1 PHD_FILE: MSMg01no279_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:48 2005
(291 letters)
>mm_chr1_167064871_167065561
Length = 691
Score = 505 bits (261), Expect = e-147
Identities = 281/291 (96%), Gaps = 6/291 (2%)
Strand = Plus / Minus
Query: 1 ctccttcctctcgtgagatactgctgaggccctggacgctccatccaagaatcataacta 60
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctccttcctctcgtgagttactgctgaggccctggacactccatccaagaatcataacta 322
Query: 61 gccgtttttagcccatgccggaagaggtgaagctctgagaatcacctctttcagttactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccgtttttagcccatgccggaagaggtgaagctctgagaatcacctctttcagttactg 262
Query: 121 gtgcagccaatatcccagtggctgcatgagtccatgttgggctcatatgagtctctgaac 180
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 261 gtgcagccaatatcccagtggctgcatgagtccacgttgggctcatacgagtctctgaac 202
Query: 181 tccacagtaggctggacctgcccacaccagtcattaatcaagaaaatgttcccacagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacagtaggctggacctgcccacaccagtcattaatcaagaaaatgttcccacagaca 142
Query: 241 tgagcacaggctggtctggtgggtgagatgatctttccgaagtgattttag 291
||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tga------gctggtctggtgggtgagatgatctttccgaagtgattttag 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
