NAATAAGTACGNGAGGTGGGGCGGAANTCACTTNAGCTAGCGATGAGTAG
GTCTTAAAGNGNAATAGGNATCTCCCACACGGTCTTTTGAGGATTTGAAC
AAACACATGTTGACATTACAACACAATTACTTTTACTGAACCCTCAGGTA
CTTATTTATGTTTATTAAAACAAACATTTTCCTCAGATATAGGTTGATGT
TTATTGAATACGTGCACTTTAAATTGTATTTTGTAATATTAAAATTTTAT
TCCTCAGAGGTATGAAAGTCAATACATGTTTTTATTCTTGGTATTTGACT
AGGTTAAATGNAGCTAAAAACTTATTAAATGGAGATTTTTTTTTTTTCCC
CCCCCCCCGCCAAAACTGCTAAGGGAAACACTGCCTCTACGTATTGGTAG
TCAAAAAAAATATATCTATCGGGGGGAGGGAGCGATCTATCTATCTATCT
ATCTATCTTAATGTTGGAGTCTGCCAAAAGACCCTCACTCACAAAGACCA
CAGAGAACAAGCTTGCTGCAAACCGTATAAGGTTTTTTAATTTGAGTCAA
TGTATTGGAGACTCCCCTTCAGTATATGGACAAGAAAATAAAGCATGAAC
AAACAAAGAAAAAACTTTTTATACCTTGGAAAGGGTATTATTTTTTTTTT
TGGGGCTAGGTGGCATATTTCTCATTGGGGTAAGAAGGTACCTTTTCCAG
CAATTGGTTGGTTTTAGTTTGGAGTACTTACCCTTAGGCCTAAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTCATAGGAAGCCTGGATAAACG
CTACTAATAGACTAAAGAAGAAAGTGCAAATTATGGAAACTTCCCACATT
TTACAAGTTTTTGGAATATGCTACACTATTAGAATTTTTAGACTCTTCAG
AAATGTAAGTCTAATTTGTTAGATTATTCTTTTTAGATTAATTTTAAAAT
AAAATGTTTTGTGAATGGTTCACAATTCTCTAGTTATTTAATGATCACAT
ATACATTTCTTATTTAATGACAATGGTTGTTCAAAATTTTGGAATGATTC
ATTTCTATAAAAAAGATATTATGGGGATAGGCAGAGAGATGCGAGCCAAT
AGTTGGCTTGACTGGGCATCTAAGAGTATAACTTTCAGCTCATTTTGAAC
AATTTGTTATGGAATTTATTAAGACATGCCAAATATTCTAAACTTTATCT
GTCTTTCTTTTGATTTTCCTACTCCTTTGGTTTGCATTAATAAAATCTTT
TCAACTATATTAGTTCTGCACTGAGCATAAATCTACTCAACAGAATAGAA
TTCATTAATTTTAAAGTGGATTAGAGTCATTTTAGTTACTGTGGCCTGGA
AATAATTCATAACTGTCAGACAATTGGGGGTAAAGTGATGATCTACCATC
AAGACATGCTCCATGCAGAGCAATGCTTAAAATTCATTGCAGCTCCACCA
TACTGCTTAACATN

Query= MSMg01no279_p04.b1 MSMg01no279_p04.b1 CHROMAT_FILE:
MSMg01no279_p04.b1 PHD_FILE: MSMg01no279_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:40 2005
         (194 letters)



>mm_chr1_27022447_27023040
          Length = 594

 Score =  335 bits (173), Expect = 1e-96
 Identities = 188/193 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacatgttgacattacaacacaattacttttactgaaccctcaggtacttatttatgttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cacatgttgacattacaacacaattacttttactgaaccctcaggtacttatttatgttt 334

                                                                       
Query: 61  attaaaacaaacattttcctcagatataggttgatgtttattgaatacgtgcactttaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 333 attaaaacaaacattttcctcagatataggttgatgtttattgaatatgtgcactttaaa 274

                                                                       
Query: 121 ttgtattttgtaatattaaaattttattcctcagaggtatgaaagtcaatacatgttttt 180
           ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttgtagtaggtaatattaaaattttattcctcagaggtatgaaagtcaatacatgttttt 214

                        
Query: 181 attcttggtattt 193
           ||||||| |||||
Sbjct: 213 attcttgttattt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space:   108996
Effective search space used:   108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no279_p04.g1 MSMg01no279_p04.g1 CHROMAT_FILE:
MSMg01no279_p04.g1 PHD_FILE: MSMg01no279_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:41 2005
         (292 letters)



>mm_chr1_26873219_26873910
          Length = 692

 Score =  557 bits (288), Expect = e-163
 Identities = 291/292 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcataggaagcctggataaacgctactaatagactaaagaagaaagtgcaaattatgg 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 cctcataggaagcctggataaacgctactaatagactaaaaaagaaagtgcaaattatgg 260

                                                                       
Query: 61  aaacttcccacattttacaagtttttggaatatgctacactattagaatttttagactct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacttcccacattttacaagtttttggaatatgctacactattagaatttttagactct 320

                                                                       
Query: 121 tcagaaatgtaagtctaatttgttagattattctttttagattaattttaaaataaaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagaaatgtaagtctaatttgttagattattctttttagattaattttaaaataaaatg 380

                                                                       
Query: 181 ttttgtgaatggttcacaattctctagttatttaatgatcacatatacatttcttattta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttgtgaatggttcacaattctctagttatttaatgatcacatatacatttcttattta 440

                                                               
Query: 241 atgacaatggttgttcaaaattttggaatgattcatttctataaaaaagata 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgacaatggttgttcaaaattttggaatgattcatttctataaaaaagata 492


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space:   193289
Effective search space used:   193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)