Query= MSMg01no280_f08.b1 MSMg01no280_f08.b1 CHROMAT_FILE:
MSMg01no280_f08.b1 PHD_FILE: MSMg01no280_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:09 2005
(381 letters)
>mm_chr1_104082452_104083232
Length = 781
Score = 696 bits (360), Expect = 0.0
Identities = 375/380 (98%)
Strand = Plus / Minus
Query: 1 atcctatgggtgtatgtgtttgtaaaacagaacaagatgcagtcttttcaacatccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atcctatgggtgtatgtgtttgtaaaacagaacaagatgcagtcttttcaacatccccag 521
Query: 61 gataagtcacaaacgacaaagcctaacttgtcagatgcatcctaattggctggagggtct 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gataagtcacaaaagacaaagcctaacttgtcagatgcatcctaattggctggagggtct 461
Query: 121 gagttttatggcttcatttcttctgggcatgaagacgcaggcatcacaatgcaggagtta 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 460 gagttttatggcttcatttcttctgggcatgaagacgcaggcatcacagtgcaggagtta 401
Query: 181 aaggaaaaagcagagaacatcagtcaaaggtgacaggactaacgcccgtgaagagaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 400 aaggaaaaagcagagaacatcagtcaaaggtgacaggactaacgcccatgaagagaaagt 341
Query: 241 ttcagtaagaggtctctcttgctaaggtttctaagggacaacaacttgtcctacatgagt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttcagtaagagctctctcttgctaaggtttctaagggacaacaacttgtcctacatgagt 281
Query: 301 cataggcctggaaagatcatgacaaatgcactgaagaaaatgagattttatgcattacag 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cataggcctggaaagatcgtgacaaatgcactgaagaaaatgagattttatgcattacag 221
Query: 361 tgccaagcataaatcattct 380
||||||||||||||||||||
Sbjct: 220 tgccaagcataaatcattct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_f08.g1 MSMg01no280_f08.g1 CHROMAT_FILE:
MSMg01no280_f08.g1 PHD_FILE: MSMg01no280_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:09 2005
(290 letters)
>mm_chr1_104028889_104029579
Length = 691
Score = 408 bits (211), Expect = e-118
Identities = 271/291 (93%), Gaps = 3/291 (1%)
Strand = Plus / Plus
Query: 1 ctcagaagcagtaggcctgtgatgcat-aaactaggttaaccatcatgtaagc-ctagga 58
||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||
Sbjct: 201 ctcagaagcagtaggcctgtgatgcataaaactaggttaaccatcatg-aagctatagga 259
Query: 59 gttatatactcatttagagttttagagttgtcagtcctattaacaataagccttggggca 118
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttatatactcatttcgagctttagagttgtcagtcctattaacaataagccttggggca 319
Query: 119 tataactgacctgagaagttgttctacacactgacgttagactcagctttatcaatatct 178
|||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||
Sbjct: 320 cataactgacccgagaagttgtactacgcactgacgttagactcagagttatcaatatct 379
Query: 179 aaggctgtgagttcagctcctatgaactgagggtgaggtcaccagccatcctatcaagct 238
|||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaggctatgaggtcagcgcctatgaactgagggtgaggtcaccagccatcctatcaagct 439
Query: 239 aaatctcttgccttctttactagtttgtgctacgcttgctgctagggttta 289
||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 440 aaatctcttgccttccaaactagtttgtgctacacttgttgctagggttta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
