CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCANGACTGGGCGGA
ATTCCCCTGTACTTGCCATATAAAGTTTGCCTGTCCAATGGGCCTCACTT
TCCAGTGATGGCCGACTTGNCACCTTTAAGAAATATGCAGCTAGAGTCCA
GAGCTCCAGGGTACTGGTTAGTTCATAATGTTGTTGCACCTACAGGGTTG
CAGATCTCTTTAGCTCCTTGGATACTTTCTCTAGCTCCTCCATTGGGGGC
CCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCT
AGGTCCCGGCCTCGTCTCTTTTTTTATAGCTATATCAGGGTCCTTTCAGC
CAATGCTTGTTATTGTATGCAACGCCGTCATCGTTTGAAGGCTAATGATG
GGATGGATCCCTGGACACGCCAGTCTATAGATGGTCCATCCTTTTGTCTC
AGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTTCCAA
TTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTTGTTCTTCTTCAGT
TTCATGTGTTTTGCAAATTGTATCTTATATCTCAGGTATACTAAGTTTCT
GGGCTAAAGTGCTCAGCATCCTTAATTATCAGGGAAATGCAAATCAAAAC
AACCCTGATATTCCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGTTGAGGA

CAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTCTTCCACCTTGTTTAACAGGAA
CAGTCATGAAGAACTTGCTTCCATCCCTGGAAAACACTGGCTCCTCGTTC
TAGAATGGAGAAGGGCACAGAAGAATCTCAGAATGTCTATGGGGTCAGCT
TTCTAAGCAACATCAAACATAGGCTGTTATTTGATTTGAATTAGTTTGGG
AAATAGAAAAATTGTTGTTTTTAATTAAAGAAAAAAAGCATGGCATTTAG
AATATTAATACATAGATTTAATGTCAGAGTATGTGTATGAATATCAAAAG
TGAAAAAAATGTTGAGGTATCATGCATTGGGGATGAACATAGCAAAAATT
AGAGTGAAGGCCTATGAGAAATGCTTACAGACAAGAACTTTATAGCTTGG
CATGCATTTGTACTCAGTAATTTATCTCTCAAACCTAAAAAGAGGATAAA
TTAATTCTATAGACCAGCTCATTGAAACGTTTTTAAATAATAAAAGTTGT
TAAGAAACATTTTTATAAAATCATTTACCAAGCAAGTTTACTATCAGGAG
ATTCCTTTCTGATACTATGCTGNAAATATAAGAAGTAAAATGCCACACAA
GTAGAAACTACAGAGCTCATTTATTCTAAATTTACTGTCATTCATTTTTC
CCTTAACATCCACATAACCCACTCTTTCT

Query= MSMg01no289_b23.g1 MSMg01no289_b23.g1 CHROMAT_FILE:
MSMg01no289_b23.g1 PHD_FILE: MSMg01no289_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:22 2005
         (616 letters)



>mm_chr1_125294931_125295947
          Length = 1017

 Score = 1064 bits (550), Expect = 0.0
 Identities = 601/619 (97%), Gaps = 5/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctcttccaccttgtttaacaggaacagtcatgaagaacttgcttccatccctggaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tcctcttccaccttgtttaacaggaacagtcatgaagaacttgcttccatctctggaaaa 260

                                                                       
Query: 61  cactggctcctcgttctagaatggagaagggcacagaagaatctcagaatgtctatgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactggctcctcgttctagaatggagaagggcacagaagaatctcagaatgtctatgggg 320

                                                                       
Query: 121 tcagctttctaagcaacatcaaacataggctgttatttgatttgaattagtttgggaaat 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 tcagctttctaagcaacatcaaacataggctgttctttgatttgaattagtttgggaaat 380

                                                                       
Query: 181 agaaaaattgttgtttttaattaaagaaaaaaagcatggcatttagaatattaatacata 240
           ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||
Sbjct: 381 agaaaaattgttgtttttaattaaagaaacaaagcatagcatttagaattttaatacata 440

                                                                       
Query: 241 gatttaatgtcagagtatgtgtatgaatatcaaaagtgaaaaaaatgttgaggtatcatg 300
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 441 gatttaatgtcagagtatgtgtatgaatatcaaaagtggaaaaa-tgttgaggtatcatg 499

                                                                       
Query: 301 cattggggatgaacatagcaaaaattagagtgaaggcctatgagaaatgcttacagacaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 cattggggatgaacatagcaaaaattagagtgaaggcctatgagaaatgtttacagacaa 559

                                                                       
Query: 361 gaactttatagcttggcatgcatttgtactcagtaatttatctctcaaacctaaaaagag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaactttatagcttggcatgcatttgtactcagtaatttatctctcaaacctaaaaagag 619

                                                                       
Query: 421 gataaattaattctatagaccagctcattgaaac--gtttttaaataataaaagt-tgtt 477
           |||||||||||||||||||||||||||| |||||  ||||||||||||||||||| | ||
Sbjct: 620 gataaattaattctatagaccagctcatcgaaacatgtttttaaataataaaagtct-tt 678

                                                                       
Query: 478 aagaaacatttttataaaatcatttaccaagcaagtttactatcaggagattcctttctg 537
           |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 679 aagaaacatttttataaaatcatttaccaagcaagtttgctatcaagagattcctttctg 738

                                                                       
Query: 538 atactatgctgnaaatataagaagtaaaatgccacacaagtagaaactacagagctcatt 597
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 739 atactatgctgaaaatataagaagtaaaatgccacacaagtagaaactacagagatcatt 798

                              
Query: 598 tattctaaatttactgtca 616
           |||| ||||||||||||||
Sbjct: 799 tattataaatttactgtca 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space:   610242
Effective search space used:   610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)