NTCTCGNNGNNNCCGNNNCNGCCTCAAAATTGGGCGCTAAAGACTCCATC
AGAGAGGACCGCGGAATCATTTTTCCAGAACTGTTGATAAGCTCCCACGG
AAGCCAGTGGTGATCTTCAAATTAGGGCTCCTCTTCACCCCAAAGGAACC
TTGGGTCCGGAAATTCCCCCCTTGGAAAGGGGAAGGGAAGGGGTAAAGGG
GGGCGAAAAAAAACCCCCTAACCCCCAAAAAAAAAAAAAATTCCGCGCCC
CACAAAAAAAAAACCCCCCCCCCCCCCCCAAAAAAAAAAAACCAAAACNN
NNTTGGGGGGGGGGGGGGGGNGGGAGGTACGCTTGCGGCCCCTCACCCCG
ACCCGGGGGGCGGGGGGTGCCCCGCCCCACGCCCCCCCAGGGCGCCCTCC
TACGGGGNNNNNNNGGGTGNGNGAGAACCCCCTCCTTCCCCTTGTTAAAG
AGAGAAGGGGGGGGGNCGGTACACCCCCCCAAACCGC

CGATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTCTAGACAAGGCGGAAGAAACCT
CCTGACTAACTATAATTGTTATCCAGTTTTAGAAGGAACTAGGAAGCAGA
AAAGAAGACATCAGACAAATGCTAAGGAAAATGGAATAAAATGCAGTCTT
TAGCTGATTATAATTAATTATGTTAAATAAATAATAGTACCGCAAGTTAC
ACACTGTATGGGAGACAATGAGTGTGTATTATTCTGGATACCTCATCATG
CCTTTTAGATTTTCTTTACATCTAAAATTTACAAGATTTTTTTTTATCTA
AGAGGAACAACTTTAACTATCCCGCTCTCTAAGACCACATGATAAAATAA
TAAAATTTAAAATATTTGGTTAGGGCCTTTCTAGTTGTGACACTGAAAAG
CAGTTTATCGCTGAACTTCCTATGTGCAATGTAAATTTAAGTATATATAA
TCCACATGAATATACATGTATATTATATACATATACATGTGTGCTGTATT
ACTTAACATATAACTTTATGTACCTGTCATATACTTAACTTATATATCAA
GTAATCAACTACACTTAAATTATTTTTGTACATGGTTGTATGGACCACAG
ACTTATTTGTTTTACCAAGGAGTCATTTCACCTTTCACTACCTTAGTTAC
TTTATTGGAAATTAAAATTAAATACT

Query= MSMg01no291_e04.g1 MSMg01no291_e04.g1 CHROMAT_FILE:
MSMg01no291_e04.g1 PHD_FILE: MSMg01no291_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:00 2005
         (651 letters)



>mm_chr1_81329156_81330206
          Length = 1051

 Score = 1228 bits (635), Expect = 0.0
 Identities = 647/651 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctctagacaaggcggaagaaacctcctgactaactataattgttatccagttttagaag 60
           |||||||||||||||||||||||||||||||||||||||||||  || || |||||||||
Sbjct: 655 tctctagacaaggcggaagaaacctcctgactaactataattgccatacatttttagaag 596

                                                                       
Query: 61  gaactaggaagcagaaaagaagacatcagacaaatgctaaggaaaatggaataaaatgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaactaggaagcagaaaagaagacatcagacaaatgctaaggaaaatggaataaaatgca 536

                                                                       
Query: 121 gtctttagctgattataattaattatgttaaataaataatagtaccgcaagttacacact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gtctttagctgattataattaattatgttaaataaataatagtaccgcaagttacacact 476

                                                                       
Query: 181 gtatgggagacaatgagtgtgtattattctggatacctcatcatgccttttagattttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtatgggagacaatgagtgtgtattattctggatacctcatcatgccttttagattttct 416

                                                                       
Query: 241 ttacatctaaaatttacaagatttttttttatctaagaggaacaactttaactatcccgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttacatctaaaatttacaagatttttttttatctaagaggaacaactttaactatcccgc 356

                                                                       
Query: 301 tctctaagaccacatgataaaataataaaatttaaaatatttggttagggcctttctagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tctctaagaccacatgataaaataataaaatttaaaatatttggttagggcctttctagt 296

                                                                       
Query: 361 tgtgacactgaaaagcagtttatcgctgaacttcctatgtgcaatgtaaatttaagtata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgtgacactgaaaagcagtttatcgctgaacttcctatgtgcaatgtaaatttaagtata 236

                                                                       
Query: 421 tataatccacatgaatatacatgtatattatatacatatacatgtgtgctgtattactta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tataatccacatgaatatacatgtatattatatacatatacatgtgtgctgtattactta 176

                                                                       
Query: 481 acatataactttatgtacctgtcatatacttaacttatatatcaagtaatcaactacact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 acatataactttatgtacctgtcatatacttaacttatatatcaagtaatcaactacact 116

                                                                       
Query: 541 taaattatttttgtacatggttgtatggaccacagacttatttgttttaccaaggagtca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 taaattatttttgtacatggttgtatggaccacagacttatttgttttaccaaggagtca 56

                                                              
Query: 601 tttcacctttcactaccttagttactttattggaaattaaaattaaatact 651
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  tttcacctttcactaccttagttactttattggaaattaaaattaaatact 5


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)