Query= MSMg01no291_k10.b1 MSMg01no291_k10.b1 CHROMAT_FILE:
MSMg01no291_k10.b1 PHD_FILE: MSMg01no291_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:30 2005
(367 letters)
>mm_chr1_25469146_25469912
Length = 767
Score = 694 bits (359), Expect = 0.0
Identities = 365/367 (99%)
Strand = Plus / Minus
Query: 1 tcaattgttgttttatcctaacttttgtctatttggaaccaatttctattattctgcctg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 567 tcaattgttgttttatcctaacttttgtctatttggaagcaatttctattattctgcctg 508
Query: 61 cttaaagctcttgctgattattttcctggagcatcttgaaatgctaactagacacacaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 507 cttaaagctcttgctgattattttcctggagcatcttgaaatgctaactagatacacaga 448
Query: 121 cagatgttctgccaatagctaaatgcgatatgagagttgttctctggttacatctttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cagatgttctgccaatagctaaatgcgatatgagagttgttctctggttacatctttggt 388
Query: 181 tatattctcaattgctcaacatgagttaggatactcatatttcttggcttattttatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tatattctcaattgctcaacatgagttaggatactcatatttcttggcttattttatctc 328
Query: 241 caacatctatttgatattttccaaaaatattttagaataattgtcctattgttgaagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caacatctatttgatattttccaaaaatattttagaataattgtcctattgttgaagcaa 268
Query: 301 agatcagtaatttttttcagtgaagaagcagagagtaaatatttcatacatggaaaccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agatcagtaatttttttcagtgaagaagcagagagtaaatatttcatacatggaaaccta 208
Query: 361 ataattt 367
|||||||
Sbjct: 207 ataattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_k10.g1 MSMg01no291_k10.g1 CHROMAT_FILE:
MSMg01no291_k10.g1 PHD_FILE: MSMg01no291_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:30 2005
(363 letters)
>mm_chr1_25296623_25297386
Length = 764
Score = 658 bits (340), Expect = 0.0
Identities = 358/364 (98%), Gaps = 1/364 (0%)
Strand = Plus / Plus
Query: 1 cataaagctcatttttttatctg-ttttttttttaactcacaactgtgacattgggaaac 59
||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||
Sbjct: 201 cataaagctcatttttttatctgtttttttttttaatttacaactgtgacattgggaaac 260
Query: 60 ttgttttctaatttcatctgtgccactggatgctgctacccagcacgtgattccctgcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttttctaatttcatctgtgccactggatgctgctacccagcacgtgattccctgcct 320
Query: 120 aactgggaatcacatccctgctaccaactagaaccttgcatattgtatttatcatagagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactgggaatcacatccctgctaccaactagaaccttgcatattgtatttatcatagagg 380
Query: 180 aatttgtagtctagaaactcaacaggaggaatacccttgctaatcgtttatttaatagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatttgtagtctagaaactcaacaggaggaatacccttgctaatcgtttatttaatagct 440
Query: 240 ctatgtgtcaaaaattattaaaaataatgaaaatgaacttggtattatagctcatgcttg 299
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatgtgtcaagcattattaaaaataatgaaaatgaacttggtattatagctcatgcttg 500
Query: 300 taatcaaaacatatgagcataaggaaagaggaaggccataagtttgaggccaacctaggt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 taatcaaaacatatgagcataaggaaagaggaaggccataagtttgaggccagcctaggt 560
Query: 360 tacc 363
||||
Sbjct: 561 tacc 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 764
Length adjustment: 9
Effective length of query: 354
Effective length of database: 755
Effective search space: 267270
Effective search space used: 267270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
