Query= MSMg01no293_c07.b1 MSMg01no293_c07.b1 CHROMAT_FILE:
MSMg01no293_c07.b1 PHD_FILE: MSMg01no293_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:27 2005
(321 letters)
>mm_chr1_148460616_148461337
Length = 722
Score = 547 bits (283), Expect = e-160
Identities = 309/321 (96%), Gaps = 7/321 (2%)
Strand = Plus / Plus
Query: 5 gaattccactcttctattttggataaaaagaatgatgttttgtgaagacagatgctgtac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccactcttctattttggataaaaagaatgatgttttgtgaagacagatgctgtac 264
Query: 65 ctggacagatag----ataaccaagctgtaaaacaacagttaaaagcactgacatagaga 120
|||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 ctggacagataggttaata---aagctgtaagacaacagttaaaagcactgacatagaga 321
Query: 121 atataaaaatccttagctttgcagagaagcaatctttttataatctagaggctgtcacac 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 322 atataaaaatccttagctttgcagagaagcaatctttttataatctagatgctgtcacac 381
Query: 181 agatcatgataagataactatagctacaaaaaggacagtaaacctagactgaaaatcaca 240
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 382 agatcatgataagataactatagctacaacaaggacagtaaacctagactcaaaatcaca 441
Query: 241 tgatacttttttgatccaacatcttcctgattataattgtcttctacagtcatactatac 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgatacgtttttgatccaacatcttcctgattataattgtcttctacagtcatactatac 501
Query: 301 tcttgtattttatttttaaaa 321
|||||||||||||||||||||
Sbjct: 502 tcttgtattttatttttaaaa 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_c07.g1 MSMg01no293_c07.g1 CHROMAT_FILE:
MSMg01no293_c07.g1 PHD_FILE: MSMg01no293_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:27 2005
(251 letters)
>mm_chr1_148630258_148630908
Length = 651
Score = 470 bits (243), Expect = e-137
Identities = 249/251 (99%)
Strand = Plus / Minus
Query: 1 cctgatttaggataaacagcttcagtatggatttttgataagaaaccagatgctcatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cctgatttaggataaacagcttcagtatggatttttgataagaaaccagatgctcatatg 392
Query: 61 caagtagtagtagctaaagtctaaaggccatgagatttgtctgttctggtagaaatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caagtagtagtagctaaagtctaaaggccatgagatttgtctgttctggtagaaatgaaa 332
Query: 121 agcaaggaacagatggctagcataaataattcaaaggagctttccaggcacttgagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agcaaggaacagatggctagcataaataattcaaaggagctttccaggcacttgagggaa 272
Query: 181 aaacagcatgtcgaactatgtttacaaggttacttgcaacttttgcgaagcaaacatttc 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 271 aaacagcatgtcgaactatgtttacaaggttacttgcaacttttgggaagcaaacgtttc 212
Query: 241 tatttccttca 251
|||||||||||
Sbjct: 211 tatttccttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
