Query= MSMg01no293_l10.b1 MSMg01no293_l10.b1 CHROMAT_FILE:
MSMg01no293_l10.b1 PHD_FILE: MSMg01no293_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:13 2005
(328 letters)
>mm_chr1_37905480_37906207
Length = 728
Score = 592 bits (306), Expect = e-173
Identities = 321/326 (98%), Gaps = 1/326 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctgttctcagaaagccaagggaggcaagaagatccagagttcaaggcaagcct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgttctcagaaagccaagggaggcaagaagatccagagttcaaggcaagcct 263
Query: 64 aggctagggtgcaagaccctctctaacaaaggcatggggatttatctgtttatgcaaaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggctagggtgcaagaccctctctaacaaaggcatggggatttatctgtttatgcaaaga 323
Query: 124 gaagaagttggggaagcagaacaatattgtatatacagactattcttgctttgaaatttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaagaagttggggaagcagaacaatattgtatatacagactattcttgctttgaaatttt 383
Query: 184 cataatagcctcataaaacttagtgggaaacatgaacaaaaaattataaaaaaa-taaag 242
|||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||
Sbjct: 384 cataatagcctcataaaacttagtggaaaatatgagcaaaaaattataaaaaaaataaag 443
Query: 243 tatgagaaaaatataacttcatccttatgataaatttaaatatgtctaactaaaaggctt 302
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 tatgagaaaaatataacttcatccttatgataaatttaaatatgtcaaactaaaaggctt 503
Query: 303 ccaaattatatgaaaatttcactttt 328
||||||||||||||||||||||||||
Sbjct: 504 ccaaattatatgaaaatttcactttt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_l10.g1 MSMg01no293_l10.g1 CHROMAT_FILE:
MSMg01no293_l10.g1 PHD_FILE: MSMg01no293_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:13 2005
(298 letters)
>mm_chr1_38110237_38110934
Length = 698
Score = 569 bits (294), Expect = e-166
Identities = 294/294 (100%)
Strand = Plus / Minus
Query: 1 agtgatgtgaagaccttgctcaaagagtggatcactactatctcaggtttgtgtggtagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agtgatgtgaagaccttgctcaaagagtggatcactactatctcaggtttgtgtggtagc 435
Query: 61 tctgtgattcgagaacaggacctgagcacaatggctcgagccccttgtctaacattacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tctgtgattcgagaacaggacctgagcacaatggctcgagccccttgtctaacattacaa 375
Query: 121 gctgtaaggcgtgctgggtcctcacctggggttttcctcctccctagatccgatggaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gctgtaaggcgtgctgggtcctcacctggggttttcctcctccctagatccgatggaaga 315
Query: 181 agacatcctgcaggttgtgagatactgcactgacctcatagaggagaaagacttggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agacatcctgcaggttgtgagatactgcactgacctcatagaggagaaagacttggaaaa 255
Query: 241 attggatctggttataaaatacatgaaaaggtaatttatttaattttttactta 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 attggatctggttataaaatacatgaaaaggtaatttatttaattttttactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
