Query= MSMg01no294_o20.b1 MSMg01no294_o20.b1 CHROMAT_FILE:
MSMg01no294_o20.b1 PHD_FILE: MSMg01no294_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:42 2005
(318 letters)
>mm_chr1_25452992_25453709
Length = 718
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%)
Strand = Plus / Minus
Query: 4 ggaattccacaaaatgtgttatgaaattcatggaaaagaaaacgtaaagttcttacagga 63
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 518 ggaattccacaaaatgtgttatgaaattcatggaaaggaaaacgtaaagttcttacagga 459
Query: 64 aaaaatactttgtggtatatctttaacatacaagagtatcaagtcatcctttgttattat 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaaatactttgtagtatatctttaacatacaagagtatcaagtcatcctttgttattat 399
Query: 124 ttcctacaattcatcaatttttatatgtggacttatggtatattttattctctgtttatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttcctacaattcatcaatttttatatgtggacttatggtatattttattctctgtttatt 339
Query: 184 tttagggcactttgaatccatattgtgtgttatgggatgactcaaaatcgtaagtggcca 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 338 tttagggcactttgaatccatattgcgtgttatgggatgactcaaaatcgtaagtggcca 279
Query: 244 atgctttgtaatattacattgtgattaatgttcaaagtatattaaataaatttagctatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atgctttgtaatattacattgtgattaatgttcaaagtatattaaataaatttagctatc 219
Query: 304 tgatattaaactgga 318
|||||||||||||||
Sbjct: 218 tgatattaaactgga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_o20.g1 MSMg01no294_o20.g1 CHROMAT_FILE:
MSMg01no294_o20.g1 PHD_FILE: MSMg01no294_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:43 2005
(289 letters)
>mm_chr1_25288578_25289267
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 tttgttggatacacctacattcatcagtgttagctattagctgtcacctgcacatgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttggatacacctacattcatcagtgttagctattagctgtcacctgcacatgcatt 260
Query: 61 tcttcctattaataggctggctaaaaggagaacatcttcctgccccaaggatttaaaagt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcctattaataggctggctaaaaggagaacatcttcctgccccaaggatttaaaagt 320
Query: 121 gcacaaaatttctctagactataagaataagaactcaaattgtgttttccttataactta 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gcacaaaatttctctaaactataagaataagaactcaaattgtgttttccttgtaactta 380
Query: 181 atattgatttgaggtctttacacaatttgctaagcatctatctgaatgatttttggatct 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 atattgatttgaggtctttacacaatttgctaagcatctatctggatgatttttggatct 440
Query: 241 gagtactggtggcaattttt-aaatttatgattggaaaatatggcacaca 289
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 gagtactggtggcaattttttaaatttatgattggaaaatatggcacaca 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
