Query= MSMg01no296_e14.b1 MSMg01no296_e14.b1 CHROMAT_FILE:
MSMg01no296_e14.b1 PHD_FILE: MSMg01no296_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:26 2005
(234 letters)
>mm_chr1_135113830_135114463
Length = 634
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Minus
Query: 1 ctgttaatcacagtggaccgagcttagctagggcataagtactaactcatcttttccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgttaatcacagtggaccgagcttagctagggcataagtactaactcatcttttccaca 329
Query: 61 gtctagatacaaacatcgggacagccaactgctccctcgtgcagcccatgagtcccagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtctagatacaaacatcgggacagccaactgctccctcgtgcagcccatgagtcccagga 269
Query: 121 tttgcagggccactctgaaagtgcgcacccttcaaagaagaggggctcccagtagatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tttgcagggccactctgaaagtgcgcacccttcaaagaagaggggctcccagtagatgaa 209
Query: 181 caactgagtctctctctctctctctctctctctctctctctcacacacacac 232
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 208 caactgagtctctctctctctctctctctctctctctctcacacacacacac 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_e14.g1 MSMg01no296_e14.g1 CHROMAT_FILE:
MSMg01no296_e14.g1 PHD_FILE: MSMg01no296_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:26 2005
(343 letters)
>mm_chr1_134962039_134962780
Length = 742
Score = 609 bits (315), Expect = e-179
Identities = 336/343 (97%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 catcagagcgccacacattaggaaggttgaggaccactgacttatgcagcgctagtaatg 60
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 201 catcagagcgccacacattaggaaggttgaggaccactgacttaggcagtgctagtaatg 260
Query: 61 gaagccaaggcgtcatgcatgctggacagacagacactctcccatggagtctggccctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagccaaggcgtcatgcatgctggacagacagacactctcccatggagtctggccctag 320
Query: 121 acaactgtcctctttgactgaagagaccctcccctttactgatgataagtacctgttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaactgtcctctttgactgaagagaccctcccctttactgatgataagtacctgttttt 380
Query: 181 gaaggactcgtgaacgctgtcctctgatctccacatatgtccgtggcattcatgccttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaggactcgtgaacgctgtcctctgatctccacatatgtccgtggcattcatgccttcc 440
Query: 241 cctaagagcaaacaaataaatgattgttaagaggaataaaccaaggatctctttctttcc 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 cctaagagcaaacaaataaatgattgttaagaggaataaaccaaggacctctttctttcc 500
Query: 301 ttgccaccacacatgatggaaagaaggataggaattagaacca 343
||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgg-agcacacatgatggaaagaaggataggaattagaacca 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 742
Length adjustment: 9
Effective length of query: 334
Effective length of database: 733
Effective search space: 244822
Effective search space used: 244822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
