XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTT
CATTTCCGAGCCCCATTTTTTAATGGGGTTATTTGCTTTTCTGAAGTCCA
CCATCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATTTGATTTA
GGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATT
GACGGTGTTTTTTGCCTTGCAGAATCTTTGGAGTTTCATTAGGTCCCATT
TGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAAT
TTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTAT
AAGTTTGAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTAGATT
TGACCTTACCACAAGGAGATAAGTATGGATTGATTCGCATTCTTCTACAT
GATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTATT
CCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGT
GTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTG
TCTCTATACCAGTACCATGCAGTTTTTACCACAATTGCTTTGTAGTAAAG
CTTTACGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAA
GAGTTTTTGCTATCCTACGGNTTTTTGTATTCTAGATGAATTTGTAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCAGTGTCTGCATTAAAATGAGTACATGTCTTGTG
ATGCACTGCTAGATCCCATGATACCTTTCTTATCATGAGGGCTGGAGGTG
AAATGAGGAAAGGGGATACAATTTGAAATGTAAATAAAGAAAATAAATAA
TAACAAAAGAAAATATATAATAAAAATGAAGAAGATAAATCAAATAAATA
AATAAATAAATAAATAAGAAAATCCTTACTTGTAGGGCTCCAAACAGATG
TACCATACTTTGCTACCCTTTTATACAGTTTTAAAAACTTTAAATATGCT
GTCTAATTTATGATTGGTTGGTTTTCATTTTTTAGAATCTAATACCCAAG
GACATATAACACACTCAATACATGTTTGGGACATGAATGAAGACATCTAG
GCTGTTCTGTGCTGTTCCAGCCACTATTCTTTGTTAGAATGAAGGAAAAA
AAAAACAATACTTGAGCTTTCTAACTATCTGAGCTAAGAAACCAATGTTC
AAAGATATTTCAATGGACCTCCCATGATAATTAAAATATTCTGTCATTGG
GCATTATACACTGACAACACGGATGTTTTTGTTTTGCTCAGCACATCTCT
GCTTAAAGTTCTAACCATAGAAATGTAGAACAAAATATTTGCCATCATAG
AACACTGTTTGGGATTCTGACCTGACATCCTGATACAGATCTTCTAGATT
TG

Query= MSMg01no299_f16.g1 MSMg01no299_f16.g1 CHROMAT_FILE:
MSMg01no299_f16.g1 PHD_FILE: MSMg01no299_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:15 2005
         (681 letters)



>mm_chr1_125049098_125050180
          Length = 1083

 Score = 1093 bits (565), Expect = 0.0
 Identities = 652/687 (94%), Gaps = 16/687 (2%)
 Strand = Plus / Minus

                                                                        
Query: 5    tgtctgcattaaaatgagtacatgtcttgtgatgcactgctagatcccatgatacctttc 64
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1083 tgtctgcattaaaatgagtacatgtcttgtgatgcactgctagatcccatgataactttc 1024

                                                                        
Query: 65   ttatca--------tgagggctggaggtgaaatgaggaaaggggatacaatttgaaatgt 116
            ||| ||        |||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1023 tta-catgggatggtgagggttggaggtgaaatgaggaaagaggataaaatttgaaatgt 965

                                                                        
Query: 117  aaataaagaaaataaataataacaaaagaaaatatataataaaaatgaagaagataaatc 176
            ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 964  aaatatagaaaatatataataa-aaaagaaaatatataataaaaatgaagaagataaat- 907

                                                                        
Query: 177  aaataaataaataaataaataaataagaaaatccttacttgtagggctccaaacagatgt 236
            ||||||||   ||| ||| ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 906  aaataaat---taattaattaattaagaaagtccttacttgtagggctccaaacagatgt 850

                                                                        
Query: 237  accatactttgctacccttttatacagttttaaaaactttaaatatgctgtctaatttat 296
             | |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 849  tcaatactttgctacccatttataaagttttacaaactttaaatatgctgtctaatttat 790

                                                                        
Query: 297  gattggttggttttca-ttttttagaatctaatacccaaggacatataacacactcaata 355
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789  gattggttggttttcatttttttagaatctaatacccaaggacatataacacactcaata 730

                                                                        
Query: 356  catgtttgggacatgaatgaagacatctaggctgttctgtgctgttccagccactattct 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729  catgtttgggacatgaatgaagacatctaggctgttctgtgctgttccagccactattct 670

                                                                        
Query: 416  ttgttagaatgaa-ggaaaaaaaaaacaatacttgagctttctaactatctgagctaaga 474
            ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 669  ttgttagaatgaaggggaaaaaaaaccaatacttgagctttctaactatctgagctaaga 610

                                                                        
Query: 475  aaccaatgttcaaagatatttcaatggacctcccatgataattaaaatattctgtcattg 534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609  aaccaatgttcaaagatatttcaatggacctcccatgataattaaaatattctgtcattg 550

                                                                        
Query: 535  ggcattatacactgacaacacggatgtttttgttttgctcagcacatctctgcttaaagt 594
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 549  ggcattatacactgacaacacagatgtttttgttttgctcagcacatctctgcttaaagt 490

                                                                        
Query: 595  tctaaccatagaaatgtagaacaaaatatttgccatcatagaacactgtttgggattctg 654
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 489  tctaaccatagaaatgtagaacaaaataattgccatcatagaacactgtttgggattctg 430

                                       
Query: 655  acctgacatcctgatacagatcttcta 681
            |||||||||||||||||||||||||||
Sbjct: 429  acctgacatcctgatacagatcttcta 403


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1083
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1073
Effective search space:   719983
Effective search space used:   719983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)