XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTC
TTTCTTCTTGGGCGATAACTCTGAGCATGTCCTCAATTAATATTCAGAGT
TCTCAACAGAATAGAGTCCCAGTTGCCTGTATTGTGACTGGCTTGATATG
CATCTGTAATTGGTGTTTTTCCTTCTCTAGTCTAGTTCCTCATTCTCCCC
TGATGCATCCCAAAATACCCTCTAAGTCAATGTGTGAAAAATTTCACCTC
CAAGTCTGCCTCTGACAGAAGGCATCTTCCTCTTGGGACTCTAAATTTCA
CCTGACATTGTTCATATCTGAAAGTACCCTGTTTTGCTTGCTTTGTTGAA
TAGTGAGTGATTTTCCTGGCTTTAGTTTATACTGAGTACCAGGCAACAGA
GTACCTCTTATGTTCAAAACAGGGTGACTGAGATAAGGCTGGCCCCACTA
ATCAGGAACAGGTGGAATGAGTAAATTTAATCAAATTTACCATCAAGTTT
CTGCCTCAACATAGAAGAAATTATCATAATTTTAAAGCTGAAATTTCTCA
TATGAAATTGCTTATATGAAATGACCAAGCAGACATCTAAGCCAGACTTT
GTTATGAAGAAGAGAAGAAAATTGCAATATTCAAAAGCACAACGTTAACA
TATGGAAGAATTCAACCTCCTCATCAAGAAGAAAATTCCTAAACTTTTAT
ATCATGTGGCTGGTATTTCACTATATTTGGCTTTACTGAGGCAAAATGTC
TGTGGACTATTTAGCTA

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCACACCCCTAAGCCCCTTACCCCATAAAAAC
CCCTAGCTTTTGAGCCTCGTGGCCGACATCCGTTATCTCCTGTGTGGGAT
GCATGTCGGTCCAGAGCTCCGTCATTAAACGTCCTCATGTAATTACATTA
GGAGATGGTCCTTTGTGATTTTTTGGGTGCACGCTGAATTGGGAATTGTG
TGGGGGTTTCTCCACTAGGTCTAACAGGGACAGATTGAGGGACAGAGAAG
TCAAGCATTTTGTTTGGAATTTATGGAGACAAATAGGAGGCAATAAAATA
GGCTAGAAAGGTTTTTATTTTGCACCCCCACTCCGAAACACACGGTGCTG
CTGAGAAGGAAGTACACCAAGGTGAAAAGAACCAAAGAGATCCTCTCTGC
TGCTAGACCCAAGAAATGAGGTCACTCATGATGCAAGCATCATTAACAGC
CTCCATCAGAGCAGCTGTAGTAGACAATGGGACCAGACGGGACTAACTTC
AAGATGTAGAGGGAAGCAGGGCATGGTGAAAATTGTCTGCAATCTCAGCA
CTGTAGTGTGTAGTTTCTACTAACCCTGCTTGGAGTTCCAGGTGGACCTT
GCTACCTGCTTCCACCCTGTTTCCCTTGGATCCGTGGACGAAAGACACTC
CCCATTTTCTCTCTCCCTAATATCACCCTACTTAATTTTAAATTGCCTTT
TTCTCTATGTAGGGN

Query= MSMg01no301_c08.b1 MSMg01no301_c08.b1 CHROMAT_FILE:
MSMg01no301_c08.b1 PHD_FILE: MSMg01no301_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:28 2005
         (636 letters)



>mm_chr1_132212679_132213714
          Length = 1036

 Score = 1174 bits (607), Expect = 0.0
 Identities = 625/631 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattctttcttcttgggcgataactctgagcatgtcctcaattaatattcagagttctc 65
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctttcttcttgggagataactctgagcatgtcctcaattaatattcagagttctc 265

                                                                       
Query: 66  aacagaatagagtcccagttgcctgtattgtgactggcttgatatgcatctgtaattggt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 266 aacagaatagagtcccagttgcctgtattgtgactggcttgatatgcatctgtaattggc 325

                                                                       
Query: 126 gtttttccttctctagtctagttcctcattctcccctgatgcatcccaaaataccctcta 185
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtttttccttctctagtttagttcctcattctcccctgatgcatcccaaaataccctcta 385

                                                                       
Query: 186 agtcaatgtgtgaaaaatttcacctccaagtctgcctctgacagaaggcatcttcctctt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agtcaatgtgtgaaaaatttcacctccaagtctgcctctgacagaaggcatcttcctctt 445

                                                                       
Query: 246 gggactctaaatttcacctgacattgttcatatctgaaagtaccctgttttgcttgcttt 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gggactctaaatttcacctgacattgttcatatctgaaagtaccctgttttgcttgcttt 505

                                                                       
Query: 306 gttgaatagtgagtgattttcctggctttagtttatactgagtaccaggcaacagagtac 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gttgaatagtgagtgattttcctggctttagtttatactgagtaccaggcaacagagtac 565

                                                                       
Query: 366 ctcttatgttcaaaacagggtgactgagataaggctggccccactaatcaggaacaggtg 425
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 566 ctcttatgttcaaaacagggtgactgagataaggctgaccccactaatcaggaacaggtg 625

                                                                       
Query: 426 gaatgagtaaatttaatcaaatttaccatcaagtttctgcctcaacatagaagaaattat 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 626 gaatgagtaaatttaatcaaatttaccatcaagtttctgcctcaacatagaagaagttat 685

                                                                       
Query: 486 cataattttaaagctgaaatttctcatatgaaattgcttatatgaaatgaccaagcagac 545
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 catatttttaaagctgaaatttctcatatgaaattgcttatatgaaatgaccaagcagac 745

                                                                       
Query: 546 atctaagccagactttgttatgaagaagagaagaaaattgcaatattcaaaagcacaacg 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atctaagccagactttgttatgaagaagagaagaaaattgcaatattcaaaagcacaacg 805

                                          
Query: 606 ttaacatatggaagaattcaacctcctcatc 636
           |||||||||||||||||||||||||||||||
Sbjct: 806 ttaacatatggaagaattcaacctcctcatc 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)