XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAT
CTTACACCACAGTGAATGACTAAAATCAAAACACAAGTGATAACTGTTGT
TGGTGAAAATATATCACCCAGGTAGCAATCCTCCACTGCTGATAAGGGTA
CAAAATTGTGCATTCACTATGGACATCAATATAATGGTTCCTCAGAAAAT
TGAAAATTGTTCTATCTCAAAAGGCAGCTATTCCACTCTTAGACATATAT
CCAAGGATGCTTTTATATACAGCAAATATTATTGTACAACTATGTTCACT
GAAGTGTCATTCATAATAGCCAGGAACTGGAAAGAACCTAGAATTCTCTC
AATTGAATATTTTAAAAAGAAAGCTTGCCACATTTACAAAATTTAGAATT
ATTCAGTTGAAATATATATATATATAATCATTAATTTTTTAGGTAAATGG
ATACAACTAGAAAAGGATCATCCTAAGTAGATTATCCAAATCCAGGGGGG
AAAATGAAGTATGTGTTGGGGGTTTGAGAGTTACCGTGCAACCAAAAATA
TACCAAATTCAGTAAAGCAAGAATAGTTTATTGAATGCACACTAAAATAC
TTAATATACAGGTCCACAAGAAGTAAAAACTCAATTGTAGTGGCAATCTG
TCCTCAGGGCAAACTTTTTATATGAAAAAACAAGGTCAAAACTTTGAAGG
CAAGCAGAAAAGGGGTACTACATTTTTTACAACTAGACAAAGTATTATCA
GCTAACCTTTAAACTTACT

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCACTTGGCACACCACATTGCTATCAAGTTTTCC
TTTCCTTAAAAAAAAAAAAGAGAGAGAATGACAAATAGTGGCATAATTTT
CTTATAACAAAAAACTAAGTACTTGAATACTTAATGTTATTACTTTGCTT
TGTACTAAATAAAAAACCTAATATATTTGATTTATGTATCACACAACATA
ATTAGTTAACTGTGTGGAAAATTAGATCAAAATATTTTGAGTGAATAAAA
CCTGTTTTATATAAATTCACAGAATACCCTTGTTATGATAGCTTACTTAG
GAATTTGATTTCTGGAGAAGAATCCCACTCTTCTTTATTATGAAGCTGTT
ATTTTGCATAATTATTTTATGTATCTCCTTGTGAGTGTGACATATGCTCA
CATATTCATGTTTCAGTACATGCATATGCTTCGGTTTGACAGTGTAAGGA
GTAAATCTATCGTCCTGTTCTCTCCTTGTCCTTCTAGTTTGAAACAGGGT
CAGTTGCTGAGCTAAGCATTTTGTCGGTCTAGCAGTCCAGGTATCCTTTT
GTTTTCACTCTCCCCATCACTGGTGCTACTGGTGATCATGGGAATGTACA
GGTTCTTAGGTAAGTTTGGGTTCTGAACTCAAGTGTTCAATTCTATTCAG
CAAGCACTCATTTATCCTGAGCCATTTCTCCAGGCTAGTTATGTAAAATT
AATAATCCATGGCCTN

Query= MSMg01no301_p01.g1 MSMg01no301_p01.g1 CHROMAT_FILE:
MSMg01no301_p01.g1 PHD_FILE: MSMg01no301_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:27 2005
         (656 letters)



>mm_chr1_112829979_112831033
          Length = 1055

 Score = 1237 bits (640), Expect = 0.0
 Identities = 652/656 (99%), Gaps = 1/656 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacttggcacaccacattgctatcaagttttcctttccttaaaaaaaaaaaagagagaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cacttggcacaccacattgctatcaagttttcctttccttaaaaaaaaaaa-gagagaga 259

                                                                       
Query: 61  atgacaaatagtggcataattttcttataacaaaaaactaagtacttgaatacttaatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgacaaatagtggcataattttcttataacaaaaaactaagtacttgaatacttaatgt 319

                                                                       
Query: 121 tattactttgctttgtactaaataaaaaacctaatatatttgatttatgtatcacacaac 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tattactttgctttgtactaagtaaaaaacctaatatatttgatttatgtatcacacaac 379

                                                                       
Query: 181 ataattagttaactgtgtggaaaattagatcaaaatattttgagtgaataaaacctgttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ataattagttaactgtgtggaaaattagatcaaaatattttgagtgaataaaacctgttt 439

                                                                       
Query: 241 tatataaattcacagaatacccttgttatgatagcttacttaggaatttgatttctggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatataaattcacagaatacccttgttatgatagcttacttaggaatttgatttctggag 499

                                                                       
Query: 301 aagaatcccactcttctttattatgaagctgttattttgcataattattttatgtatctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 aagaatcccactcttctttattatgaagctgttattttgcataattattttatgtatatc 559

                                                                       
Query: 361 cttgtgagtgtgacatatgctcacatattcatgtttcagtacatgcatatgcttcggttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttgtgagtgtgacatatgctcacatattcatgtttcagtacatgcatatgcttcggttt 619

                                                                       
Query: 421 gacagtgtaaggagtaaatctatcgtcctgttctctccttgtccttctagtttgaaacag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gacagtgtaaggagtaaatctatcgtcctgttctctccttgtccttctagtttgaaacag 679

                                                                       
Query: 481 ggtcagttgctgagctaagcattttgtcggtctagcagtccaggtatccttttgttttca 540
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 ggtcagttgctgagctaagcatttggtcggtctagcagtccaggtatccttttgttttca 739

                                                                       
Query: 541 ctctccccatcactggtgctactggtgatcatgggaatgtacaggttcttaggtaagttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctctccccatcactggtgctactggtgatcatgggaatgtacaggttcttaggtaagttt 799

                                                                   
Query: 601 gggttctgaactcaagtgttcaattctattcagcaagcactcatttatcctgagcc 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gggttctgaactcaagtgttcaattctattcagcaagcactcatttatcctgagcc 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space:   675070
Effective search space used:   675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)