Query= MSMg01no302_a23.b1 MSMg01no302_a23.b1 CHROMAT_FILE:
MSMg01no302_a23.b1 PHD_FILE: MSMg01no302_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:36 2005
(323 letters)
>mm_chr1_130263992_130264714
Length = 723
Score = 547 bits (283), Expect = e-160
Identities = 298/303 (98%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 21 atttaacactaaggtggtaaattgtgggggttttgttttatttttttgtaatttatttaa 80
|||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 723 atttaacactaaggtggtaaattgtggggggtttctttta-ttttttgtaatttatttaa 665
Query: 81 ttttatatgcattcgtatgagggagtcaggtcctcttacagacttacagatagttgtgag 140
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 664 ttttatatgcattcgtatgagggagtcaggtcctcttacagacttacagacagttgtgag 605
Query: 141 ctgatatgtgggtgctgggaatagaacccgggtcctttggaagaacagccagtgctctta 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctgatatgtgggtgctgggaatagaacccgggtcctttggaagaacagccagtgctctta 545
Query: 201 accattgagccatttctccagactataaattgttttcacttgatagatttgaagaaaatt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 accattgagccatttctccagactataaattgttttcacttgatagatttgaagaaaatt 485
Query: 261 aaagcttatatttaggagttaacactccagatgttttagagctttttgctttacagtggt 320
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 484 aaagcttatatttaggagttaacactccaaatgttttagagctttttgctttacagtggt 425
Query: 321 ttt 323
|||
Sbjct: 424 ttt 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_a23.g1 MSMg01no302_a23.g1 CHROMAT_FILE:
MSMg01no302_a23.g1 PHD_FILE: MSMg01no302_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:37 2005
(293 letters)
>mm_chr1_130084590_130085278
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/291 (98%), Gaps = 4/291 (1%)
Strand = Plus / Plus
Query: 1 tgtacgaccttcttaatcctgcctgaggctacatacaattccttccttgtccactctgcc 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 tgtacgaccttcttaatcctgcctgaggctaca----attccttccttgtccactctgcc 256
Query: 61 ttgacttcattcaacttgtttccgaggaattgcttccctttgctgttgtataactgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttgacttcattcaacttgtttccgaggaattgcttccctttgctgttgtataactgcctt 316
Query: 121 tacactgctgtgtttcgccaggagctttgtaggactgactcccacttttacttaatttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tacactgctgtgtttcgccaggagctttgtaggactgactcccacttttacttaatttga 376
Query: 181 tggaaataaggtcagtacagcttttaaaaatttcaaggatttgtttatggttatatgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggaaataaggtcagtacagcttttaaaaatttcaaggatttgtttatggttatatgtct 436
Query: 241 cagattattgtgtcttaggaataattttgcctatcgattctcaggcctgtg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cagattattgtgtcttaggaataattttgcctatcgattctcaggcctgtg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 689
Length adjustment: 9
Effective length of query: 284
Effective length of database: 680
Effective search space: 193120
Effective search space used: 193120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
