Query= MSMg01no302_i11.b1 MSMg01no302_i11.b1 CHROMAT_FILE:
MSMg01no302_i11.b1 PHD_FILE: MSMg01no302_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:11 2005
(314 letters)
>mm_chr1_178772394_178773108
Length = 715
Score = 596 bits (308), Expect = e-175
Identities = 311/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcttggtatgtgatatgaagcacacagattatgttttggttttgtctagtgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcttggtatgtgatatgaagcacacagattatgttttggttttgtctagtgt 263
Query: 64 gtttatcgatatattagagttctatttattgaaaaggtagtcttgtgccctcatgattta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttatcgatatattagagttctatttattgaaaaggtagtcttgtgccctcatgattta 323
Query: 124 catgttgtgttt-gtgcctgtggttttaagggttcaacccaacagcctgcacatgtgagg 182
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgttgtgttttgtgcctgtggttttaagggttcaacccaacagcctgcacatgtgagg 383
Query: 183 tgagcaagcacacacctgggaacctcccctgcatctcagcaccttttccatggcttacaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgagcaagcacacacctgggaacctcccctgcatctcagcaccttttccatggcttacaa 443
Query: 243 gtgttctgtttctctatgtgtttcattgtgcgcatactaaactgtcttgattattatagc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgttctgtttctctatgtgtttcattgtgcgcatactaaactgtcttgattattatagc 503
Query: 303 ctgaattgtaga 314
||||||||||||
Sbjct: 504 ctgaattgtaga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_i11.g1 MSMg01no302_i11.g1 CHROMAT_FILE:
MSMg01no302_i11.g1 PHD_FILE: MSMg01no302_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:11 2005
(285 letters)
>mm_chr1_178896544_178897228
Length = 685
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%)
Strand = Plus / Minus
Query: 1 cttcctctgctagtccctcacaagaatggggtttacttccagagaatgagcagggccttt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cttcctatgctagtccctcacaagaatggggtttacttccagagaatgagcagggccttt 425
Query: 61 ccaagaatatggtggaaagcaaaatgatgtctacaggagatgggacctcccccagcttgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 424 ccaagaatatggtggaaagcaaaatgatgtctacaggagatgggacctcctccagcctgt 365
Query: 121 ggtcctagtcactgacggaggtggagaagcagccacctgcctgtggtacagtgacaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtcctagtcactgacggaggtggagaagcagccacctgcctgtggtacagtgacaaata 305
Query: 181 tgaaagcacaggctcttgggaggtggggggtaggaaggagtcctgattcaaagtttcaca 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 304 tgaaagcacaggctcttgggaggtggggggtgggaaggagtcctgattcaaagtttcata 245
Query: 241 tttctgtgacataaatacatctatcactgtcaattttaagctag 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tttctgtgacataaatacatctatcactgtcaattttaagctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
