ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTACAACCCCATGGGACAAGGAATAGTTGAACGTGCTCATCGCACCT
TAAAGAATTGGCTTTTTAAAACAAAAGAGGGGCAGCTATATCCCCCAAGG
TCACCAAAGGCCCACCTTGCCTTCACCTTATTTGTCCTAAATTTCTTGCA
CACCGATATCAAGGGCCAGTCTGCAGCGGATCGCCACTGGCATCCAGTTA
CTTCTAATTCTTATGCATTGGTAAAATGGAAGGACCCCCTGACTAATGAA
TGGAAGGGTCCAGATCCAGTTCTAATTTGGGGTAGGGGCTCAGTTTGTGT
TTTTTCACGAGATGAAGATGGAGCGTGGTGGCTGCCAGAGAGATTAATTC
GTCAGATGAACACAGATTCTGACTCTTCTGGTAAGTATCATTCTAAAGAC
TAAAATTCCTTTTGTGCTTAGAATTCAGCTGAGAGCGAAAGCTCCCAAAG
CTGTTTTCCAGCTACTCTCTGAGCCAGCTCCCGACAGGAGGCCGGAGACT
AGCCTCAGCTTTACAATTTGCATTTGAATAAAGTACCTAGACTTCCCTGA
AAGAAGTTCTGCTTTCCTACTTTCTCACTGTCGAGATTTTGTCTTTCAAG
CAGGTAAATCAACATTCTCGAAGCGGATGTGCATCCCCGCCCCCCTAGAG
CACACAGGTGGCTGCTGTTATCTCCTTTCCAAGGACATTTCC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTTCCTCTGTTCCTTTGCTATTTGGGTTTTA
ACTATCTAGGCCATAGGCATAATCTCCACCTATATACATGCTAAACTAAA
GTATCTTTTTTAAAGAAAAGGGAGTGACAGTGCACATTTAACCTGTGAGA
TGTGTATATCCCACAGGAACTTGTGCCTGGTGGGGGATGGGCTCACCTTC
CCATGAAGCTGAGCTAACCTTGAGCAGAAATGAATCATGTGTTTTGCTAC
CATGATGGCTAGTGACTTCTTCAAAATGGAAGCAGCATGTGACTTGGCTG
TCTGCTTTGGTTCTGAAAAAAAAAAAAGGTAAATGCCATGTGACTTCTTA
GTTACTGCGGCATAAAACAAAATGGAAGCACTCATATACTTTCTAATGTC
ATTGAGCTGTCACTCAAGGGACTATCCCATTTATACCAAAGAGGTGACAC
CAGATTTCCCTGGTATATGTTTGTTTTGACACTTTCTGTGCATAATATAT
TTGCTGGTTTCCAGACAGAATTGAAGAATTTTCTTAGCCATGTGCCTCCA
ATACTAGTCAGATATGAGTCACCCTAGAGCCAGTCTTGGGAAAGCACAGA
CCCTACCAGAACTAAAACAATAGAATACTAAGTTCTAGAAAAGCTGTTAC
CAGTAGACAACTATGACAGCTGCAGGCTGGAGATGGA

Query= MSMg01no303_h14.g1 MSMg01no303_h14.g1 CHROMAT_FILE:
MSMg01no303_h14.g1 PHD_FILE: MSMg01no303_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:24 2005
         (657 letters)



>mm_chr1_197049633_197050689
          Length = 1057

 Score = 1185 bits (613), Expect = 0.0
 Identities = 647/659 (98%), Gaps = 2/659 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcctctgttcctttgctatttgggttttaactatctaggccataggcataatctccac 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 199 tttcctctgttcctttgctatttgggttctaactatctaggccataggcatcatctccac 258

                                                                       
Query: 61  ctatatacatgctaaactaaagtatcttttttaaagaaaagggagtgacagtgcacattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctatatacatgctaaactaaagtatcttttttaaagaaaagggagtgacagtgcacattt 318

                                                                       
Query: 121 aacctgtgagatgtgtatatcccacaggaacttgtgcctggtgggggatgggctcacctt 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aacctgtgagatgtgtatattccacaggaacttgtgcctggtgggggatgggctcacctt 378

                                                                       
Query: 181 cccatgaagctgagctaaccttgagcagaaatgaatcatgtgttttgctaccatgatggc 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 379 cccatgaagctgagctaaccttgagcagaaataaatcatgtgttttgctaccatgatggc 438

                                                                       
Query: 241 tagtgacttcttcaaaatggaagcagcatgtgacttggctgtctgctttggttctgaaaa 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tagtgacttcatcaaaatggaagcagcatgtgacttggctgtctgctttggttctgaaaa 498

                                                                       
Query: 301 aaaaaaaa--ggtaaatgccatgtgacttcttagttactgcggcataaaacaaaatggaa 358
           ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 499 aaaaaaaaaaggtaaatgccatgtgacttcttggttactgcggcataaaacaaaatggag 558

                                                                       
Query: 359 gcactcatatactttctaatgtcattgagctgtcactcaagggactatcccatttatacc 418
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcactcatatactttctgatgtcattgagctgtcactcaagggactatcccatttatacc 618

                                                                       
Query: 419 aaagaggtgacaccagatttccctggtatatgtttgttttgacactttctgtgcataata 478
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaagaggtgactccagatttccctggtatatgtttgttttgacactttctgtgcataata 678

                                                                       
Query: 479 tatttgctggtttccagacagaattgaagaattttcttagccatgtgcctccaatactag 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tatttgctggtttccagacagaattgaagaattttcttagccatgtgcctccaatactag 738

                                                                       
Query: 539 tcagatatgagtcaccctagagccagtcttgggaaagcacagaccctaccagaactaaaa 598
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 739 tcagatatgagtcaccctagagccagtcttgggaaagcgcagaccctaccagaactaaaa 798

                                                                      
Query: 599 caatagaatactaagttctagaaaagctgttaccagtagacaactatgacagctgcagg 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 caatagaatactaagttctagaaaagctgttaccagtagacaactatgacagctgcagg 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)