Query= MSMg01no305_o05.b1 MSMg01no305_o05.b1 CHROMAT_FILE:
MSMg01no305_o05.b1 PHD_FILE: MSMg01no305_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:23 2005
(423 letters)
>mm_chr1_67867975_67868798
Length = 824
Score = 746 bits (386), Expect = 0.0
Identities = 404/410 (98%), Gaps = 3/410 (0%)
Strand = Plus / Plus
Query: 15 ggaattc-ccacaaaaggggatgggaacagagctcccacagaacaaaaaa-gggtttaga 72
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 215 ggaattcaccacaaaaggggatgggaacagagctcccacagaac-aaaaaagggtttaga 273
Query: 73 ccctaacaggccttaagtgagaacacctgggaggaataatatttaaactgactataaaga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ccctaacaggccttaagtgagaacacctgggaggaataatatttaaactgactataaaga 333
Query: 133 actccataagaaaaagccatgatctctggatgggttggtttggcacaatgataaaaagac 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 actccataagaaaaagccatgatctctggatgggttggtttggcacaatgataaaaagac 393
Query: 193 accctatttatcatatggtctgttataccagtcaatgtgagggtgcccgtccctgggttc 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 accctatttatcatatggtctgttataccagtcaatgtgagggtgcccgtccctgggttc 453
Query: 253 ccacatgaacccctgaattgactcataaacaggaaaaatgtaaacaagacaaatccaacc 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccacatgaacccctgaattgactcataaacaggaaaaatgtaaacaagacaaatccaacc 513
Query: 313 aatttggtcctgaagttcttcttctcaaaatgctgggtctagaaaatgccaaccatgttt 372
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aatttggtcctgaagttcttcttctcaaaatgctgggtctagaaaatgccaaccatgagc 573
Query: 373 tccttaagctaggttggtactgatgaacatgctcgcatgcaaggcagatt 422
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tccttaagctaggttggtactgatgaacatgctcgcatgcaaggcagatt 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_o05.g1 MSMg01no305_o05.g1 CHROMAT_FILE:
MSMg01no305_o05.g1 PHD_FILE: MSMg01no305_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:23 2005
(377 letters)
>mm_chr1_68058651_68059427
Length = 777
Score = 706 bits (365), Expect = 0.0
Identities = 374/377 (99%)
Strand = Plus / Minus
Query: 1 tttgaaagcagcattgttaattagtagcagaatatgaacaccacatgaaaccttacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tttgaaagcagcattgttaattagtagcagaatatgaacaccacatgaaaccttacaaat 418
Query: 61 ataaaaattataaatcttcatgtatactcaaaacatcaataataccttagtattcatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ataaaaattataaatcttcatgtatactcaaaacatcaataataccttagtattcatttg 358
Query: 121 aaaggcttgaaattaacaggctgacaaatggccattaagtatgctctcctgcttttacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaaggcttgaaattaacaggctgacaaatggccattaagtatgctctcctgcttttacct 298
Query: 181 actcttgtctgataacatcattatttttatacttattttgtcatactgacacttattatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 actcttgtctgataacatcattatttttatacttattttgtcatactgacacttattatt 238
Query: 241 ttgaataatataaaaggaaaataaattggcctgcagagatggtacaagcctttaacccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttgaataatataaaaggaaaataaattggcctgcagagatggtacaagcctttaacccta 178
Query: 301 acactcaaatatctgtgagttcaaaggaatttgttctacatagtgagttccaagccagtc 360
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 177 acactcaaatatctgtgagttcaaaggaacctgctctacatagtgagttccaagccagtc 118
Query: 361 aagactacatagtgaga 377
|||||||||||||||||
Sbjct: 117 aagactacatagtgaga 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
